RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 RPS6KA5O75582 802 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 RPA1P27694 616 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-212ENST00000451542 CLCN3P51790 818 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 WDR5P61964 334 aaKnown RBP13.45□□□□□ -0.26
SMPD4-212ENST00000451542 BECN1Q14457 450 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 LPIN1Q14693 890 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 GPNMBQ14956 572 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 ARL6IP4Q66PJ3 421 aaKnown RBP13.45□□□□□ -0.26
SMPD4-212ENST00000451542 ANO5Q75V66 913 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 ZBTB10Q96DT7 871 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-212ENST00000451542 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-212ENST00000451542 SLC28A3Q9HAS3 691 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 PCDHA11Q9Y5I1 949 aa13.45□□□□□ -0.26
SMPD4-212ENST00000451542 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 ASAP2O43150 1006 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 DGAT1O75907 488 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 STBD1O95210 358 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 VTNP04004 478 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 DNAJB2P25686 324 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 CCT6AP40227 531 aaKnown RBP13.44□□□□□ -0.26
SMPD4-212ENST00000451542 NLRP11P59045 1033 aaKnown RBP13.44□□□□□ -0.26
SMPD4-212ENST00000451542 ATP2C1P98194 919 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-212ENST00000451542 NFX1Q12986 1120 aaKnown RBP13.44□□□□□ -0.26
SMPD4-212ENST00000451542 NBR1Q14596 966 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 LRRC71Q8N4P6 559 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 NLRP7Q8WX94 980 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 TIFAQ96CG3 184 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 VWCEQ96DN2 955 aa13.44□□□□□ -0.26
SMPD4-212ENST00000451542 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-212ENST00000451542 SUCLA2Q9P2R7 463 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-212ENST00000451542 IGKV6-21A0A0C4DH24 114 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 TLL1O43897 1013 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 NPEPPSP55786 919 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 KIZQ2M2Z5 673 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 ZNF410Q86VK4 478 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 MYOCDQ8IZQ8 938 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 KCTD17Q8N5Z5 321 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 DEFB123Q8N688 67 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 C4orf32Q8N8J7 132 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 SNX29Q8TEQ0 813 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 PSPC1Q8WXF1 523 aaKnown RBP13.43□□□□□ -0.26
SMPD4-212ENST00000451542 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 MTRQ99707 1265 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 PBX4Q9BYU1 374 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
SMPD4-212ENST00000451542 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 PADI3Q9ULW8 664 aa13.43□□□□□ -0.26
SMPD4-212ENST00000451542 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 ZSCAN20P17040 1043 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-212ENST00000451542 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
SMPD4-212ENST00000451542 CD52P31358 61 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 GPC3P51654 580 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 TFDP1Q14186 410 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-212ENST00000451542 EMC2Q15006 297 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 RHPN2Q8IUC4 686 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 LINC01465Q8N7H1 131 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 IGSF22Q8N9C0 903 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 AK8Q96MA6 479 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 OSMRQ99650 979 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 SH2D3AQ9BRG2 576 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 NT5C3AQ9H0P0 336 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 WRAP73Q9P2S5 460 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-212ENST00000451542 DBR1Q9UK59 544 aaKnown RBP13.42□□□□□ -0.26
SMPD4-212ENST00000451542 LOXHD1Q8IVV2 1947 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
SMPD4-212ENST00000451542 DENND3A2RUS2 1198 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 ARHGEF35A5YM69 484 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 SLC26A4O43511 780 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 GPR32O75388 356 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 MED24O75448 989 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 GJB5O95377 273 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMPD4-212ENST00000451542 RARRES1P49788 294 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
SMPD4-212ENST00000451542 PIGOQ8TEQ8 1089 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-212ENST00000451542 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 RAD9AQ99638 391 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 AGO3Q9H9G7 860 aaKnown RBP13.41□□□□□ -0.26
SMPD4-212ENST00000451542 C1orf112Q9NSG2 853 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 DNM3Q9UQ16 869 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 MTMR6Q9Y217 621 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 NOC2LQ9Y3T9 749 aaKnown RBP13.41□□□□□ -0.26
SMPD4-212ENST00000451542 INSL6Q9Y581 213 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 COL4A3BPQ9Y5P4 624 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms