RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 PPP2R3BQ9Y5P8 575 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 FAM13AO94988 1023 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 TUBBP07437 444 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 ERCC3P19447 782 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 LMNB1P20700 586 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 NFIL3Q16649 462 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 REPS2Q8NFH8 660 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 SMCR8Q8TEV9 937 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 FIZ1Q96SL8 496 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 NAPGQ99747 312 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 CXorf56Q9H5V9 222 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 PICK1Q9NRD5 415 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 ADAMTS5Q9UNA0 930 aa16.77■□□□□ 0.28
CCHCR1-208ENST00000451521 NOL4O94818 638 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 GCNT3O95395 438 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 SYF2O95926 243 aaKnown RBP16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 ITGB3BPQ13352 177 aaPredicted RBP16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 PGM5Q15124 567 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 WDR93Q6P2C0 686 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 PDXDC1Q6P996 788 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 AFAP1L1Q8TED9 768 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 ATG4CQ96DT6 458 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 PARVGQ9HBI0 331 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 CEP72Q9P209 647 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 ARHGAP20Q9P2F6 1191 aa16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.27
CCHCR1-208ENST00000451521 UBE4BO95155 1302 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 SBF1O95248 1867 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 C19orf81C9J6K1 198 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 LCA5LO95447 670 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 AARSP49588 968 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 MIER3Q7Z3K6 550 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 TADA2BQ86TJ2 420 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 SUGP1Q8IWZ8 645 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 KLRG1Q96E93 195 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 LRRC53A6NM62 1247 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 SLC16A3O15427 465 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 P4HBP07237 508 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 OAZ1P54368 228 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 DNAJC21Q5F1R6 531 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 NOL9Q5SY16 702 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 CCDC91Q7Z6B0 441 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 GPC2Q8N158 579 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 MYCT1Q8N699 235 aa16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-208ENST00000451521 SSC5DA1L4H1 1573 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 MYH11P35749 1972 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 SFI1A8K8P3 1242 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 TGFB1I1O43294 461 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 NR3C1P04150 777 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 RPL13P26373 211 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 KCNH2Q12809 1159 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 MTMR1Q13613 665 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 RNF207Q6ZRF8 634 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 RRAGAQ7L523 313 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 CCDC42Q96M95 316 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 VIPAS39Q9H9C1 493 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 POLD4Q9HCU8 107 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 PXMP2Q9NR77 195 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 TBC1D22BQ9NU19 505 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 ZMYM2Q9UBW7 1377 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 LYPLA2O95372 231 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 DSG3P32926 999 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 ZNF720Q7Z2F6 126 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 METTL14Q9HCE5 456 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 TRIM10Q9UDY6 481 aa16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 ARMCX3Q9UH62 379 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-208ENST00000451521 A0A087WUV0 522 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 DDX39AO00148 427 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 ZNF263O14978 683 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 IPO7O95373 1038 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 PLEKP08567 350 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 EIF2AK2P19525 551 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 AMPD2Q01433 879 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 KCNA1Q09470 495 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 CCDC122Q5T0U0 273 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 XRRA1Q6P2D8 792 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 MMS22LQ6ZRQ5 1243 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 JAKMIP2Q96AA8 810 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 PURBQ96QR8 312 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 DBR1Q9UK59 544 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 GUCA1BQ9UMX6 200 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 ZHX2Q9Y6X8 837 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 CENPFP49454 3210 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 RCCD1A6NED2 376 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 KRT86O43790 486 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 AKAP3O75969 853 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 VAV2P52735 878 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 ASTE1Q2TB18 679 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 KIAA1328Q86T90 577 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
CCHCR1-208ENST00000451521 LSM14BQ9BX40 385 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms