RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 NBEAQ8NFP9 2946 aa9.24□□□□□ -0.93
LINC01961-201ENST00000449954 LOC400499M0QZD8 3231 aa9.24□□□□□ -0.93
LINC01961-201ENST00000449954 CNOT1A5YKK6 2376 aaKnown RBP9.23□□□□□ -0.93
LINC01961-201ENST00000449954 TMEM8BA6NDV4 472 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 MINDY4BA8MYZ0 360 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 LRP3O75074 770 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 PRDM1O75626 825 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 CHRNA1P02708 482 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
LINC01961-201ENST00000449954 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
LINC01961-201ENST00000449954 SH3BP2P78314 561 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 HSDL1Q3SXM5 330 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 TAF2Q6P1X5 1199 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 FAM43BQ6ZT52 329 aaPredicted RBP9.23□□□□□ -0.93
LINC01961-201ENST00000449954 CCDC149Q6ZUS6 474 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 RSPH3Q86UC2 560 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 ZBTB44Q8NCP5 570 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 EHBP1Q8NDI1 1231 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 DCAF4Q8WV16 495 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 MRPS27Q92552 414 aaKnown RBP9.23□□□□□ -0.93
LINC01961-201ENST00000449954 PAG1Q9NWQ8 432 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 STX8Q9UNK0 236 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 NRCAMQ92823 1304 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 MYH7P12883 1935 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 CACNA1IQ9P0X4 2223 aa9.23□□□□□ -0.93
LINC01961-201ENST00000449954 HIDE1A8MVS5 230 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 AXIN1O15169 862 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 LAMTOR5O43504 91 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 FOXD2O60548 495 aaPredicted RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 LILRB3O75022 631 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 EIF3JO75822 258 aaKnown RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 RPLP2P05387 115 aaKnown RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 SCG2P13521 617 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 LAG3P18627 525 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 PPM1AP35813 382 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 ATP8B2P98198 1209 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 PLCB3Q01970 1234 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 MGAT3Q09327 533 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 CELF3Q5SZQ8 465 aaKnown RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 ZSCAN25Q6NSZ9 544 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 LRSAM1Q6UWE0 723 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 UNQ6494/PRO21346Q6UXR6 183 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 MAML2Q8IZL2 1156 aaPredicted RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 COLGALT1Q8NBJ5 622 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 PJA1Q8NG27 643 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 LINC01599Q8WXQ3 324 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 MRS2Q9HD23 443 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 PARD6AQ9NPB6 346 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 ZSCAN32Q9NX65 697 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 LRFN2Q9ULH4 789 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 SQORQ9Y6N5 450 aa9.22□□□□□ -0.93
LINC01961-201ENST00000449954 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
LINC01961-201ENST00000449954 HELZ2Q9BYK8 2649 aaKnown RBP9.21□□□□□ -0.93
LINC01961-201ENST00000449954 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.21□□□□□ -0.94
LINC01961-201ENST00000449954 LILRB5O75023 590 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 GGPS1O95749 300 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 AVPP01185 164 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 LGALS2P05162 132 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 SRFP11831 508 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 ADAM17P78536 824 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 APOBRQ0VD83 1088 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 SMC1AQ14683 1233 aaKnown RBP9.21□□□□□ -0.94
LINC01961-201ENST00000449954 TUSC1Q2TAM9 212 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 SLFNL1Q499Z3 407 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 RMDN3Q96TC7 470 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 USP26Q9BXU7 913 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 SETD4Q9NVD3 440 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.94
LINC01961-201ENST00000449954 CA14Q9ULX7 337 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 LOXHD1Q8IVV2 1947 aa9.21□□□□□ -0.94
LINC01961-201ENST00000449954 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 PATJQ8NI35 1801 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 NAV2Q8IVL1 2488 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 GSG1L2A8MUP6 293 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 NARSO43776 548 aaKnown RBP9.2□□□□□ -0.94
LINC01961-201ENST00000449954 BCAR3O75815 825 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 SLC3A2P08195 630 aaKnown RBP9.2□□□□□ -0.94
LINC01961-201ENST00000449954 WEE2P0C1S8 567 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 TGFB3P10600 412 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 SLC16A2P36021 539 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 MAGEA9P43362 315 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 TDO2P48775 406 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 ARHGAP4P98171 946 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 TFAP4Q01664 338 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 KRT17Q04695 432 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 BMS1Q14692 1282 aaKnown RBP9.2□□□□□ -0.94
LINC01961-201ENST00000449954 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 LMBR1Q8WVP7 490 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 NXPE3Q969Y0 559 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
LINC01961-201ENST00000449954 BCO2Q9BYV7 579 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 FAM117AQ9C073 453 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 PUS7LQ9H0K6 701 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms