RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 CLUL1Q15846 466 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 ARHGAP15Q53QZ3 475 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 CELF3Q5SZQ8 465 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 OLFML2BQ68BL8 750 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 KIF12Q96FN5 646 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 RANBP17Q9H2T7 1088 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 FOXP1Q9H334 677 aaPredicted RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 TRMT13Q9NUP7 481 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 RGL1Q9NZL6 768 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 A0A1W2PQ45 241 aaPredicted RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 A0A1W2PQY0 241 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 POTEMA6NI47 508 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 GJA8P48165 433 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 ELAVL2Q12926 359 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 SURF1Q15526 300 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 LLGL2Q6P1M3 1020 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 SENP7Q9BQF6 1050 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 C11orf84Q9BUA3 381 aaPredicted RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 PANK4Q9NVE7 773 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 PRMT7Q9NVM4 692 aaPredicted RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 SDK1Q7Z5N4 2213 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 N4BP3O15049 544 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 CTNNA2P26232 953 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 CDC25AP30304 524 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 GRB14Q14449 540 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 EMC2Q15006 297 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 FAM26FQ5R3K3 315 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 LARP4BQ92615 738 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.26□□□□□ -0.93
HCG18-238ENST00000449544 POLD4Q9HCU8 107 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 SLC8A2Q9UPR5 921 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 ZNF536O15090 1300 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 CSF2RAP15509 400 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 GAP43P17677 238 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 TRIM32Q13049 653 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 HS1BP3Q53T59 392 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 ATAT1Q5SQI0 421 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 MYSM1Q5VVJ2 828 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 PLA2G4FQ68DD2 849 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 VSIG10LQ86VR7 867 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 DBF4BQ8NFT6 615 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 AFAP1L1Q8TED9 768 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 BRPF3Q9ULD4 1205 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 INSL6Q9Y581 213 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 SMTNL1A8MU46 457 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 SLC16A4O15374 487 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 XYLBO75191 536 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 RAB27AP51159 221 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 NPEPPSP55786 919 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 GPM6BQ13491 265 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 RNF139Q8WU17 664 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 AK8Q96MA6 479 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 KCNH3Q9ULD8 1083 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 GAS2O43903 313 aaKnown RBP9.25□□□□□ -0.93
HCG18-238ENST00000449544 MMP1P03956 469 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 PLA2G4BP0C869 781 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 AMPD2Q01433 879 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 BTBD8Q5XKL5 378 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 TRAPPC12Q8WVT3 735 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 FAM149B1Q96BN6 582 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 RPGRIP1Q96KN7 1286 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 MAP3K14Q99558 947 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 EIF2AK1Q9BQI3 630 aaKnown RBP9.25□□□□□ -0.93
HCG18-238ENST00000449544 KIF9Q9HAQ2 790 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 IL17RBQ9NRM6 502 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 CD52P31358 61 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 TROAPQ12815 778 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 TRIM5Q9C035 493 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 PCIF1Q9H4Z3 704 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 LRRC4Q9HBW1 653 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 KLK14Q9P0G3 267 aa9.25□□□□□ -0.93
HCG18-238ENST00000449544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.25□□□□□ -0.93
HCG18-238ENST00000449544 BRWD3Q6RI45 1802 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 CUTAO60888 179 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 LGR5O75473 907 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 LDHAP00338 332 aaKnown RBP9.24□□□□□ -0.93
HCG18-238ENST00000449544 PFKMP08237 780 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 SMPD1P17405 629 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 SYT1P21579 422 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 XPAP23025 273 aaPredicted RBP9.24□□□□□ -0.93
HCG18-238ENST00000449544 LONP1P36776 959 aaKnown RBP9.24□□□□□ -0.93
HCG18-238ENST00000449544 KARSQ15046 597 aaKnown RBP9.24□□□□□ -0.93
HCG18-238ENST00000449544 USP38Q8NB14 1042 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 RGS22Q8NE09 1264 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 SEPT5Q99719 369 aaPredicted RBP9.24□□□□□ -0.93
HCG18-238ENST00000449544 R3HDMLQ9H3Y0 253 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 TMEM206Q9H813 350 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 MAD2L2Q9UI95 211 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 ATRNL1Q5VV63 1379 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 LOC102724159A0A0B4J2E5 919 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 NPTXRO95502 500 aa9.24□□□□□ -0.93
HCG18-238ENST00000449544 POMCP01189 267 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms