RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 DDX3YO15523 660 aaKnown RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 EVI5O60447 810 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 H2AFZP0C0S5 128 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 TUBB8Q3ZCM7 444 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 C10orf76Q5T2E6 689 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 AADACL2Q6P093 401 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 H2AFVQ71UI9 128 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 EIF1ADQ8N9N8 165 aaKnown RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 SEC14L1Q92503 715 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 SYT11Q9BT88 431 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 SUCLA2Q9P2R7 463 aaPredicted RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 VAV3Q9UKW4 847 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 NOVA2Q9UNW9 492 aaKnown RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 RPA1P27694 616 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 VPS72Q15906 364 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 BMT2Q1RMZ1 405 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 ZC2HC1CQ53FD0 456 aaPredicted RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 RNF187Q5TA31 235 aaPredicted RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 TBC1D22AQ8WUA7 517 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 OSBPL7Q9BZF2 842 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 SMCHD1A6NHR9 2005 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 F8VZ95 297 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 TRAPPC3O43617 180 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 FLOT1O75955 427 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 KIAA0754O94854 1291 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 GCNT3O95395 438 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 EEF2P13639 858 aaKnown RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 NMT1P30419 496 aaKnown RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 YTHDF3Q7Z739 585 aaKnown RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 SLF2Q8IX21 1173 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 TXLNGYQ9BZA5 131 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 TYW1Q9NV66 732 aaKnown RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 BCS1LQ9Y276 419 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 BZW2Q9Y6E2 419 aaKnown RBP14.88□□□□□ -0.03
POLR1B-209ENST00000448770 LY75O60449 1722 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 QSER1Q2KHR3 1735 aa14.88□□□□□ -0.03
POLR1B-209ENST00000448770 MSH4O15457 936 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 FGGP02679 453 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 SHBGP04278 402 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 MAGOHP61326 146 aaKnown RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 ZNF211Q13398 564 aaPredicted RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 USH1GQ495M9 461 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 CBWD6Q4V339 395 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 CBWD3Q5JTY5 395 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 CBWD5Q5RIA9 395 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 APOBEC3HQ6NTF7 200 aaKnown RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 CCDC13Q8IYE1 715 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 MDM1Q8TC05 714 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 PIGOQ8TEQ8 1089 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 RAPGEF5Q92565 580 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 MAGOHBQ96A72 148 aaKnown RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 C8orf37Q96NL8 207 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 VCPKMTQ9H867 229 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 COG5Q9UP83 839 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 DNM1LO00429 736 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 LRRN2O75325 713 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 ABCB4P21439 1286 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 HOXA13P31271 388 aaPredicted RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 PPATQ06203 517 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 ACTN3Q08043 901 aaPredicted RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 DHX9Q08211 1270 aaKnown RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 SWT1Q5T5J6 900 aaKnown RBP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 SLC35G2Q8TBE7 412 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.87□□□□□ -0.03
POLR1B-209ENST00000448770 LRRC45Q96CN5 670 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 DNM3Q9UQ16 869 aa14.87□□□□□ -0.03
POLR1B-209ENST00000448770 A0A0A6YYK5 440 aaPredicted RBP14.86□□□□□ -0.03
POLR1B-209ENST00000448770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.86□□□□□ -0.03
POLR1B-209ENST00000448770 CALUO43852 315 aaPredicted RBP14.86□□□□□ -0.03
POLR1B-209ENST00000448770 SERPINB2P05120 415 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 GYS1P13807 737 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 PPP2R2AP63151 447 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 SLFN12Q8IYM2 578 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 ALG3Q92685 438 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 GLG1Q92896 1179 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 CD248Q9HCU0 757 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 GMNCA6NCL1 334 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 CCDC188H7C350 402 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 TRIM49P0CI25 452 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 TRIM49CP0CI26 452 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 JAG1P78504 1218 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 DDR1Q08345 913 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 DOK7Q18PE1 504 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 FIZ1Q96SL8 496 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 CEP89Q96ST8 783 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 SLITRK6Q9H5Y7 841 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 NCANO14594 1321 aa14.86□□□□□ -0.03
POLR1B-209ENST00000448770 DDTLA6NHG4 134 aaPredicted RBP14.85□□□□□ -0.03
POLR1B-209ENST00000448770 GOLGA6L10A6NI86 522 aa14.85□□□□□ -0.03
POLR1B-209ENST00000448770 PHF20L1A8MW92 1017 aa14.85□□□□□ -0.03
POLR1B-209ENST00000448770 SLC16A3O15427 465 aaKnown RBP14.85□□□□□ -0.03
POLR1B-209ENST00000448770 MNAT1P51948 309 aa14.85□□□□□ -0.03
POLR1B-209ENST00000448770 CTTNQ14247 550 aaKnown RBP14.85□□□□□ -0.03
POLR1B-209ENST00000448770 DRAP1Q14919 205 aaPredicted RBP14.85□□□□□ -0.03
POLR1B-209ENST00000448770 IFI16Q16666 785 aaKnown RBP14.85□□□□□ -0.03
POLR1B-209ENST00000448770 Q4G0T1 1027 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms