RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 IPO9Q96P70 1041 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 POP1Q99575 1024 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 ALG13Q9NP73 1137 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 ZNF302Q9NR11 478 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 TBC1D22BQ9NU19 505 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 KCNJ14Q9UNX9 436 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 MRPL42Q9Y6G3 142 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 ESYT2A0FGR8 921 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 FAM86C2PA6NEL3 165 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 IPO5O00410 1097 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 GPR182O15218 404 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 DCXO43602 365 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 RPS6KA5O75582 802 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 CCNE2O96020 404 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 GNA11P29992 359 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 SARSP49591 514 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 ADAM15Q13444 863 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 SMAD2Q15796 467 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 CSPP1Q1MSJ5 1256 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 SWSAP1Q6NVH7 229 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 KIAA0319LQ8IZA0 1049 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 ZMYND12Q9H0C1 365 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 IGFLR1Q9H665 355 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 C6orf50Q9HD87 102 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 C1orf112Q9NSG2 853 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 TMEM260Q9NX78 707 aa15.52■□□□□ 0.08
PDLIM2-213ENST00000448520 MUC6Q6W4X9 2439 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 FAM86B1E9PN63 330 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 DDX39AO00148 427 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 DHX15O43143 795 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 MBTPS2O43462 519 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 ITGB1P05556 798 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 FAM86B2P0C5J1 330 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 SETQ01105 290 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 SMAD4Q13485 552 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 CAMK1Q14012 370 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 ZNF746Q6NUN9 644 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 SLC24A5Q71RS6 500 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 ZNF710Q8N1W2 664 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 KLHL23Q8NBE8 558 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 POF1BQ8WVV4 589 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 CRYGNQ8WXF5 182 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 BBXQ8WY36 941 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 TMX1Q9H3N1 280 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 ERVK-5Q9HDB9 667 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 AAASQ9NRG9 546 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 RGS18Q9NS28 235 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 DAXXQ9UER7 740 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 TCEAL9Q9UHQ7 104 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 CD207Q9UJ71 328 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 GINS2Q9Y248 185 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 PCDHB12Q9Y5F1 795 aa15.51■□□□□ 0.07
PDLIM2-213ENST00000448520 IGLV3-22A0A075B6J6 115 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 DENND3A2RUS2 1198 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 MAGEB2O15479 319 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 CRYBB1P53674 252 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 UBE3AQ05086 875 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 DLX2Q07687 328 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 PKP1Q13835 747 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 TMEM266Q2M3C6 531 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 PAN2Q504Q3 1202 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 CCDC60Q8IWA6 550 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 CKAP2LQ8IYA6 745 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 SMAP1Q8IYB5 467 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 BICD2Q8TD16 824 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 WASF1Q92558 559 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 C8orf76Q96K31 380 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 ZNF577Q9BSK1 485 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 ST3GAL5Q9UNP4 418 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 CEP131Q9UPN4 1083 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 NOC2LQ9Y3T9 749 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 PCDHA10Q9Y5I2 948 aa15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 MAFBQ9Y5Q3 323 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-213ENST00000448520 EYA4O95677 639 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 PSAPP07602 524 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 ATP4AP20648 1035 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 SYT1P21579 422 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 NDUFV1P49821 464 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 NLRP5P59047 1200 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 NPY5RQ15761 445 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 FOXD4L5Q5VV16 416 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 PDE12Q6L8Q7 609 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 REXO1Q8N1G1 1221 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 EFHBQ8N7U6 833 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 RASGRP4Q8TDF6 673 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 OXER1Q8TDS5 423 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 FOXD4L4Q8WXT5 416 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 ADAM2Q99965 735 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 CDHR5Q9HBB8 845 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 ATG2AQ2TAZ0 1938 aa15.49■□□□□ 0.07
PDLIM2-213ENST00000448520 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 VPS37CA5D8V6 355 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 ZBTB42B2RXF5 422 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 C9IYK1 514 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 DNAJB1P25685 340 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 TMOD1P28289 359 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 CIITAP33076 1130 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms