RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 CNTRLQ7Z7A1 2325 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 MFAP3LO75121 409 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CDH16O75309 829 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 HEXIM1O94992 359 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 HOXD12P35452 270 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 PLCD1P51178 756 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 FAM133BQ5BKY9 247 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 DDX42Q86XP3 938 aaKnown RBP eCLIP3.13□□□□□ -1.91
CHD9-203ENST00000447540 PHC3Q8NDX5 983 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 AIDAQ96BJ3 306 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 YME1L1Q96TA2 773 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 WDR12Q9GZL7 423 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 HMG20AQ9NP66 347 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 FAIMQ9NVQ4 179 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DMTF1Q9Y222 760 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 EXOC6BQ9Y2D4 811 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ARHGEF10O15013 1369 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 URB2Q14146 1524 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 MYH7P12883 1935 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SSU72P8A0A1W2PR75 194 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 NDUFA10O95299 355 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 GNA14O95837 355 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 S100BP04271 92 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 GNAQP50148 359 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 GEMIN4P57678 1058 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 GUCY1A3Q02108 690 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MTX1Q13505 466 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 RABL6Q3YEC7 729 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ANGPTL8Q6UXH0 198 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PDCD6IPQ8WUM4 868 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 TTC25Q96NG3 672 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CUEDC2Q9H467 287 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PCDHGA3Q9Y5H0 932 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 GSTTP1A0A1W2PQM5 241 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SAGE2PA6NJ88 616 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 B8ZZF3 427 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PGRMC1O00264 195 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 RANBP6O60518 1105 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ATP2C2O75185 946 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 RGS7P49802 495 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ITGB3BPQ13352 177 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 RPS6KA1Q15418 735 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZNF829Q3KNS6 432 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ARMCX5Q6P1M9 558 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MCM10Q7L590 875 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PNPT1Q8TCS8 783 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZNF274Q96GC6 653 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 CCDC43Q96MW1 224 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 AGXT2Q9BYV1 514 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 IFIH1Q9BYX4 1025 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 PITPNM3Q9BZ71 974 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 KCNH3Q9ULD8 1083 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PACSIN2Q9UNF0 486 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 JCADQ9P266 1359 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ARHGEF11O15085 1522 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SYF2O95926 243 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 PTDSS1P48651 473 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 GPSM2P81274 684 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ACVR2BQ13705 512 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SPARCL1Q14515 664 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ANGPT1Q15389 498 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 BBS9Q3SYG4 887 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 TMEM63BQ5T3F8 832 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZNF589Q86UQ0 364 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 TPH2Q8IWU9 490 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 S100ZQ8WXG8 99 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 BIRC8Q96P09 236 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 TESK2Q96S53 571 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 KCNK16Q96T55 309 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CRNKL1Q9BZJ0 848 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ANKZF1Q9H8Y5 726 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ABCF3Q9NUQ8 709 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 RHBDL2Q9NX52 303 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MAP3K20Q9NYL2 800 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 PADI4Q9UM07 663 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PNPLA7Q6ZV29 1317 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 WDR19Q8NEZ3 1342 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 GPR75-ASB3A0A0A6YYF3 556 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PTPDC1A2A3K4 754 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 UNC5CO95185 931 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 VAV1P15498 845 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 IL12AP29459 219 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 LONP1P36776 959 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ATP2B2Q01814 1243 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MLECQ14165 292 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZNF423Q2M1K9 1284 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 HSP90AA4PQ58FG1 418 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 C3orf62Q6ZUJ4 267 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SETD3Q86TU7 594 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 FERMT3Q86UX7 667 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CCDC25Q86WR0 208 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CDR2LQ86X02 465 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 NDUFAF2Q8N183 169 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CNBD1Q8NA66 436 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 APBB2Q92870 758 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 TMEM109Q9BVC6 243 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 EHD2Q9NZN4 543 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SLC12A4Q9UP95 1085 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 HPS5Q9UPZ3 1129 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms