RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GABPAQ06546 454 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 KCNC3Q14003 757 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 PTGISQ16647 500 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 DUSP28Q4G0W2 176 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 N4BP2L1Q5TBK1 243 aaPredicted RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 SNRNP48Q6IEG0 339 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 PI16Q6UXB8 463 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 NETO1Q8TDF5 533 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 BHMTQ93088 406 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 ERVK-5Q9HDB9 667 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 PARD6AQ9NPB6 346 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 DMGDHQ9UI17 866 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 PLAGL2Q9UPG8 496 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 NR2E1Q9Y466 385 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 KINO60870 393 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 MYL3P08590 195 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 SP100P23497 879 aaPredicted RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 CPT1AP50416 773 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 RBM10P98175 930 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 DPYDQ12882 1025 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 TRIM71Q2Q1W2 868 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 TMEM184AQ6ZMB5 413 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 MAML2Q8IZL2 1156 aaPredicted RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 FIBCD1Q8N539 461 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 DBF4BQ8NFT6 615 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 P2RX5Q93086 422 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 TSR2Q969E8 191 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 CALR3Q96L12 384 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 NOL10Q9BSC4 688 aaKnown RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 GSX2Q9BZM3 304 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 SRCIN1Q9C0H9 1055 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 RAI14Q9P0K7 980 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 DLGAP2Q9P1A6 1054 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 LCTP09848 1927 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.96□□□□□ -1.78
PMS1-215ENST00000447232 TMEM8BA6NDV4 472 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 A6NJR5 290 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 ASB14A6NK59 587 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 FAM229AH3BQW9 127 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 ASGR2P07307 311 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 PLEKHG4Q58EX7 1191 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 PRRT3Q5FWE3 981 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 GDF6Q6KF10 455 aaPredicted RBP3.96□□□□□ -1.78
PMS1-215ENST00000447232 SYCE2Q6PIF2 218 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 FBXO16Q8IX29 292 aaPredicted RBP3.96□□□□□ -1.78
PMS1-215ENST00000447232 ANKRD35Q8N283 1001 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 SPATA5Q8NB90 893 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 SPPL3Q8TCT6 385 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 KIAA1671Q9BY89 1806 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 TENM4Q6N022 2769 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 KPNA6O60684 536 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 CSPG5O95196 566 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 ITGB1P05556 798 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 PLCD1P51178 756 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 TIMM10P62072 90 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 TBC1D8BQ0IIM8 1120 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 GRIK4Q16099 956 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 HIF1AQ16665 826 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 RTN1Q16799 776 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 ZNF528Q3MIS6 628 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 ZNF618Q5T7W0 954 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 IER5Q5VY09 327 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 NAA16Q6N069 864 aaPredicted RBP3.96□□□□□ -1.78
PMS1-215ENST00000447232 TMEM179Q6ZVK1 233 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 CLEC10AQ8IUN9 316 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 C1orf210Q8IVY1 113 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 ZDHHC14Q8IZN3 488 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 CHST13Q8NET6 341 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 MORC4Q8TE76 937 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 DDX1Q92499 740 aaKnown RBP3.96□□□□□ -1.78
PMS1-215ENST00000447232 WNT8BQ93098 351 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 IL17RAQ96F46 866 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 NEK1Q96PY6 1258 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 EPC1Q9H2F5 836 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 VTA1Q9NP79 307 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 CACNA2D2Q9NY47 1150 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 FBXO40Q9UH90 709 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 USP18Q9UMW8 372 aa3.96□□□□□ -1.78
PMS1-215ENST00000447232 DDX49Q9Y6V7 483 aaKnown RBP3.96□□□□□ -1.78
PMS1-215ENST00000447232 EMSYQ7Z589 1322 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 ADGRA3Q8IWK6 1321 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 RBM47A0AV96 593 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 FSD2A1L4K1 749 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 USP17L12C9JPN9 530 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 USP17L21D6R901 530 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 LILRB5O75023 590 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 GRNP28799 593 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 DUSP6Q16828 381 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 NAALADL2Q58DX5 795 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 ANKRD54Q6NXT1 300 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 TTC6Q86TZ1 520 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 RBM23Q86U06 439 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 ANKMY2Q8IV38 441 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 Q8N3U1 123 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 SECISBP2LQ93073 1101 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 IFIH1Q9BYX4 1025 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 POMKQ9H5K3 350 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 SH2D4AQ9H788 454 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 VRTNQ9H8Y1 702 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 GPR108Q9NPR9 543 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms