RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ZBTB43O43298 467 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 HOXA2O43364 376 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 TECP42680 631 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 PLPP4Q5VZY2 271 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 TMEM184AQ6ZMB5 413 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 ZBTB33Q86T24 672 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 FAM228AQ86W67 206 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 TCF25Q9BQ70 676 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 TMEM117Q9H0C3 514 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 NGRNQ9NPE2 291 aaKnown RBP27.68■■■□□ 2.02
PMS1-214ENST00000446877 ENTPD7Q9NQZ7 604 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 HCSTQ9UBK5 93 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 TCEAL9Q9UHQ7 104 aa27.68■■■□□ 2.02
PMS1-214ENST00000446877 IPO5O00410 1097 aaKnown RBP27.67■■■□□ 2.02
PMS1-214ENST00000446877 PLCB3Q01970 1234 aa27.67■■■□□ 2.02
PMS1-214ENST00000446877 KRT17Q04695 432 aa27.67■■■□□ 2.02
PMS1-214ENST00000446877 APOBRQ0VD83 1088 aa27.67■■■□□ 2.02
PMS1-214ENST00000446877 ANKRD54Q6NXT1 300 aa27.67■■■□□ 2.02
PMS1-214ENST00000446877 TRMT1LQ7Z2T5 733 aaKnown RBP27.67■■■□□ 2.02
PMS1-214ENST00000446877 ABI1Q8IZP0 508 aa27.67■■■□□ 2.02
PMS1-214ENST00000446877 BBXQ8WY36 941 aaPredicted RBP27.67■■■□□ 2.02
PMS1-214ENST00000446877 CWH43Q9H720 699 aa27.67■■■□□ 2.02
PMS1-214ENST00000446877 ZBTB42B2RXF5 422 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 FAM86B1E9PN63 330 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 DHX15O43143 795 aaKnown RBP27.66■■■□□ 2.02
PMS1-214ENST00000446877 C22orf31O95567 290 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 VTNP04004 478 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 FAM86B2P0C5J1 330 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 PTPN21Q16825 1174 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 JAKMIP3Q5VZ66 844 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 ZNF577Q9BSK1 485 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 S1PR5Q9H228 398 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 TBC1D22BQ9NU19 505 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 CEP131Q9UPN4 1083 aa27.66■■■□□ 2.02
PMS1-214ENST00000446877 ZDBF2Q9HCK1 2354 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 ZSCAN20P17040 1043 aaPredicted RBP27.65■■■□□ 2.02
PMS1-214ENST00000446877 HOXB8P17481 243 aaPredicted RBP27.65■■■□□ 2.02
PMS1-214ENST00000446877 ATP4AP20648 1035 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 PPM1AP35813 382 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 CLK2P49760 499 aaKnown RBP27.65■■■□□ 2.02
PMS1-214ENST00000446877 FUT2Q10981 343 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 LLGL2Q6P1M3 1020 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 RASGRP4Q8TDF6 673 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 IRF2BPLQ9H1B7 796 aa27.65■■■□□ 2.02
PMS1-214ENST00000446877 MAFBQ9Y5Q3 323 aaPredicted RBP27.65■■■□□ 2.02
PMS1-214ENST00000446877 MAGEB2O15479 319 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 GPR32O75388 356 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 TCF15Q12870 199 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 DSC3Q14574 896 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 ZNF746Q6NUN9 644 aaPredicted RBP27.64■■■□□ 2.02
PMS1-214ENST00000446877 KCNT2Q6UVM3 1135 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 TMC7Q7Z402 723 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 ASIC4Q96FT7 647 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 ZNF558Q96NG5 402 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 APOL5Q9BWW9 433 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 BRPF3Q9ULD4 1205 aa27.64■■■□□ 2.02
PMS1-214ENST00000446877 GOLGA8AA7E2F4 631 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 GOLGA8BA8MQT2 603 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 ST18O60284 1047 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 PSAPP07602 524 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 CYP3A4P08684 503 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 TMOD1P28289 359 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 KCNC3Q14003 757 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 MCTP2Q6DN12 878 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 DHX32Q7L7V1 743 aaKnown RBP27.63■■■□□ 2.01
PMS1-214ENST00000446877 SMAP1Q8IYB5 467 aaPredicted RBP27.63■■■□□ 2.01
PMS1-214ENST00000446877 LRRC43Q8N309 656 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 MAP7D2Q96T17 732 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 AKT3Q9Y243 479 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 PCDHA10Q9Y5I2 948 aa27.63■■■□□ 2.01
PMS1-214ENST00000446877 KIAA1671Q9BY89 1806 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 IGLV3-22A0A075B6J6 115 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 HIDE1A8MVS5 230 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 AVPR2P30518 371 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 SETQ01105 290 aaPredicted RBP27.62■■■□□ 2.01
PMS1-214ENST00000446877 SYCE2Q6PIF2 218 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 ZNF710Q8N1W2 664 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 CASD1Q96PB1 797 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 SPG21Q9NZD8 308 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 NAP1L2Q9ULW6 460 aaPredicted RBP27.62■■■□□ 2.01
PMS1-214ENST00000446877 NR2E1Q9Y466 385 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 SAMM50Q9Y512 469 aa27.62■■■□□ 2.01
PMS1-214ENST00000446877 NLRP11P59045 1033 aaKnown RBP27.61■■■□□ 2.01
PMS1-214ENST00000446877 EXOSC10Q01780 885 aaKnown RBP27.61■■■□□ 2.01
PMS1-214ENST00000446877 TPRNQ4KMQ1 711 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 LRRC55Q6ZSA7 311 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 RNF169Q8NCN4 708 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 CASP10Q92851 521 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 FAM167AQ96KS9 214 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 TCEANC2Q96MN5 208 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 TSHZ2Q9NRE2 1034 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 GABBR1Q9UBS5 961 aa27.61■■■□□ 2.01
PMS1-214ENST00000446877 KLF18A0A0U1RQI7 1052 aa27.6■■■□□ 2.01
PMS1-214ENST00000446877 SP100P23497 879 aaPredicted RBP27.6■■■□□ 2.01
PMS1-214ENST00000446877 CLCN3P51790 818 aa27.6■■■□□ 2.01
PMS1-214ENST00000446877 VCPP55072 806 aaKnown RBP27.6■■■□□ 2.01
PMS1-214ENST00000446877 CES5AQ6NT32 575 aa27.6■■■□□ 2.01
PMS1-214ENST00000446877 EFCAB12Q6NXP0 572 aa27.6■■■□□ 2.01
PMS1-214ENST00000446877 C6orf50Q9HD87 102 aa27.6■■■□□ 2.01
PMS1-214ENST00000446877 EIF4BP23588 611 aaKnown RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms