RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 EAPPQ56P03 285 aaPredicted RBP10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 TDRD12Q587J7 1177 aaKnown RBP10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 SFMBT2Q5VUG0 894 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 SWSAP1Q6NVH7 229 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 PDXDC1Q6P996 788 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 C4orf19Q8IY42 314 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 FAM186BQ8IYM0 893 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 PDCL2Q8N4E4 241 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 ANKRD7Q92527 254 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 INPP4AQ96PE3 977 aaPredicted RBP10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 EIF3CQ99613 913 aaKnown RBP10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 BTBD7Q9P203 1132 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 CEP72Q9P209 647 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 FRMD4BQ9Y2L6 1034 aa10.45□□□□□ -0.74
COL6A4P1-201ENST00000446690 RCCD1A6NED2 376 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 KIF11P52732 1056 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 PEX3P56589 373 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 IRX3P78415 501 aaPredicted RBP10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 CDK17Q00537 523 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 FSTL1Q12841 308 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 RAPGEF1Q13905 1077 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 ZNF746Q6NUN9 644 aaPredicted RBP10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 SEPT14Q6ZU15 432 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 LACRTQ9GZZ8 138 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 PCIF1Q9H4Z3 704 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 HAUS4Q9H6D7 363 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 JPH1Q9HDC5 661 aaPredicted RBP10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 AGPAT3Q9NRZ7 376 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 MRFAP1Q9Y605 127 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 DUSP10Q9Y6W6 482 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 MACROD2A1Z1Q3 448 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 CCDC169A6NNP5 214 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 SLC16A3O15427 465 aaKnown RBP10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 KRT86O43790 486 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 EXOC3O60645 756 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 PLS3P13797 630 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 KCNA2P16389 499 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 HNRNPH3P31942 346 aaKnown RBP10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 EPHX2P34913 555 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 STXBP2Q15833 593 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 EXOC3L4Q17RC7 722 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 LBX2Q6XYB7 198 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 ANO5Q75V66 913 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 CHST13Q8NET6 341 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 UBXN4Q92575 508 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 CDCA5Q96FF9 252 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 CEP170P1Q96L14 293 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 IFIH1Q9BYX4 1025 aaKnown RBP10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 PCDHA13Q9Y5I0 950 aa10.44□□□□□ -0.74
COL6A4P1-201ENST00000446690 MYPNQ86TC9 1320 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 TISP43B9A030 160 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 ZNF263O14978 683 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 SLC16A4O15374 487 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 LYPLA2O95372 231 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 PSAPP07602 524 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 GFPT1Q06210 699 aaPredicted RBP10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 KIF5AQ12840 1032 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 SLC9C1Q4G0N8 1177 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 OTUD6AQ7L8S5 288 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 ANKRD13AQ8IZ07 590 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 SLC35C1Q96A29 364 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 CDHR1Q96JP9 859 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 DRC1Q96MC2 740 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 NAPGQ99747 312 aaPredicted RBP10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 EDEM3Q9BZQ6 932 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 SLC9A2Q9UBY0 812 aa10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
COL6A4P1-201ENST00000446690 ENC1O14682 589 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 PON1P27169 355 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 SOX10P56693 466 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 ACTR2P61160 394 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 CBX1P83916 185 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 SP2Q02086 613 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 PPATQ06203 517 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 GBP6Q6ZN66 633 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 CYFIP1Q7L576 1253 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 HAUS6Q7Z4H7 955 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 ERO1BQ86YB8 467 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 SPAG5Q96R06 1193 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 NUCKS1Q9H1E3 243 aaKnown RBP10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 ANKEF1Q9NU02 776 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 MYO1AQ9UBC5 1043 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 PHIPQ8WWQ0 1821 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 UBE4BO95155 1302 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 TRIM49P0CI25 452 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 TRIM49CP0CI26 452 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 VAV2P52735 878 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 USP50Q70EL3 339 aaPredicted RBP10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 EEPD1Q7L9B9 569 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 GOLGA5Q8TBA6 731 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 ATP6V0A1Q93050 837 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 ACCSQ96QU6 501 aa10.42□□□□□ -0.74
COL6A4P1-201ENST00000446690 SENP7Q9BQF6 1050 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms