RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ZNF792Q3KQV3 632 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 SPECC1Q5M775 1068 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPP1R18Q6NYC8 613 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 IRF2BP1Q8IU81 584 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 CEP170P1Q96L14 293 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 YME1L1Q96TA2 773 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 GAS2L1Q99501 681 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 GABBR1Q9UBS5 961 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 ATP2A1O14983 1001 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 ERLIN2O94905 339 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SMC2O95347 1197 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 IDEP14735 1019 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SMPD1P17405 629 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SETQ01105 290 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 RILPL1Q5EBL4 403 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SEPT8Q92599 483 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPP2R3CQ969Q6 453 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 RIOX1Q9H6W3 641 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 RAB21Q9UL25 225 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 CCDC169A6NNP5 214 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 TULP2O00295 520 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 HARSP12081 509 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SMARCA1P28370 1054 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 CYP2C18P33260 490 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 AMPD2Q01433 879 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 PGM5Q15124 567 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SPECC1LQ69YQ0 1117 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 DTHD1Q6ZMT9 781 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 ANKS1AQ92625 1134 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 PAGE5Q96GU1 130 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 FAM167AQ96KS9 214 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 IFT74Q96LB3 600 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 NLRP4Q96MN2 994 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 FUT8Q9BYC5 575 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 ANKZF1Q9H8Y5 726 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 RIC8AQ9NPQ8 531 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 SETD4Q9NVD3 440 aa8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 DICER1Q9UPY3 1922 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-208ENST00000442054 INO80B-WBP1J3KQ70 363 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 ARVCFO00192 962 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 POLR2DO15514 142 aaKnown RBP8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 ATP8B1O43520 1251 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 CNMDO75829 334 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 GYPCP04921 128 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 MOGSQ13724 837 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 HAUS3Q68CZ6 603 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 METTL7BQ6UX53 244 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF467Q7Z7K2 595 aaPredicted RBP8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 INO80BQ9C086 356 aaPredicted RBP8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 DISC1Q9NRI5 854 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 FLRT1Q9NZU1 646 aa8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.15□□□□□ -1.11
CDC42BPA-208ENST00000442054 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 A0A1W2PQ45 241 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 A0A1W2PQY0 241 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 POTEB3A0JP26 581 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 ATP2C1P98194 919 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 POTEBQ6S5H4 581 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 BADQ92934 168 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 GPRASP2Q96D09 838 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 EPSTI1Q96J88 318 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 APOL6Q9BWW8 343 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 KCNH7Q9NS40 1196 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 REXO2Q9Y3B8 237 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 PCDHA10Q9Y5I2 948 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 SNAI1O95863 264 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 CYBAP13498 195 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 CTGFP29279 349 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 IKBKEQ14164 716 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 CC2D1AQ6P1N0 951 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 SLC39A5Q6ZMH5 540 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 CATSPER4Q7RTX7 472 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 VSIG10LQ86VR7 867 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 SLFN12Q8IYM2 578 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 MSANTD4Q8NCY6 345 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 MXRA8Q9BRK3 442 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 TRPV6Q9H1D0 765 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 EPC1Q9H2F5 836 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 LIMA1Q9UHB6 759 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 NFE2L3Q9Y4A8 694 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 MYH7BA7E2Y1 1941 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 RRN3P2A6NIE6 340 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 RSPH10B2B2RC85 870 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 CBFA2T2O43439 604 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 RSPH10BP0C881 870 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 NAALADL2Q58DX5 795 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 APBB1IPQ7Z5R6 666 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 TRIM50Q86XT4 487 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 PLIN2Q99541 437 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 SRRTQ9BXP5 876 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 LRWD1Q9UFC0 647 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 SIPA1L1O43166 1804 aa8.14□□□□□ -1.11
CDC42BPA-208ENST00000442054 LRRIQ4A6NIV6 560 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms