RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 NT5DC3Q86UY8 548 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 MICAL1Q8TDZ2 1067 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 NPHP3-ACAD11A0A0J9YXS1 232 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 GNA11P29992 359 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 GPSM2P81274 684 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 POU5F1Q01860 360 aaKnown RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 ADAM9Q13443 819 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 SLC29A2Q14542 456 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 TMEM266Q2M3C6 531 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 CCDC38Q502W7 563 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 C12orf60Q5U649 245 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 USP17L2Q6R6M4 530 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 RBM46Q8TBY0 533 aaKnown RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 WDR66Q8TBY9 1149 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 NOP53Q9NZM5 478 aaKnown RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 STK38LQ9Y2H1 464 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 SNX24Q9Y343 169 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 C6orf229H3BNL8 230 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 NQO1P15559 274 aaKnown RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 ZNF268Q14587 947 aaPredicted RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 DENND2CQ68D51 928 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 REXO1Q8N1G1 1221 aaKnown RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 ZNF483Q8TF39 744 aaPredicted RBP22.01■■□□□ 1.11
SHOX2-203ENST00000441443 STXBP5LQ9Y2K9 1186 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 CCDC88AQ3V6T2 1871 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 AFF2P51816 1311 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 UCHL3P15374 230 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 SBK1Q52WX2 424 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 ARMC2Q8NEN0 867 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 NEK9Q8TD19 979 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 KCNMB3Q9NPA1 279 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 OSGEPQ9NPF4 335 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 BATF3Q9NR55 127 aa22.01■■□□□ 1.11
SHOX2-203ENST00000441443 CFAP73A6NFT4 308 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 IGF2BP3O00425 579 aaKnown RBP eCLIP22■■□□□ 1.11
SHOX2-203ENST00000441443 HGSO14964 777 aaPredicted RBP22■■□□□ 1.11
SHOX2-203ENST00000441443 BAG3O95817 575 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 NCALDP61601 193 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 DR1Q01658 176 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 C10orf76Q5T2E6 689 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 CEP63Q96MT8 703 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 PABPC3Q9H361 631 aaKnown RBP22■■□□□ 1.11
SHOX2-203ENST00000441443 ZHX3Q9H4I2 956 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 ECT2Q9H8V3 914 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 ERVK-5Q9HDB9 667 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 SUCLA2Q9P2R7 463 aaPredicted RBP22■■□□□ 1.11
SHOX2-203ENST00000441443 RREB1Q92766 1687 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 RARAP10276 462 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 ZNF211Q13398 564 aaPredicted RBP22■■□□□ 1.11
SHOX2-203ENST00000441443 LRRC14Q15048 493 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 PRR5LQ6MZQ0 368 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 FBXO25Q8TCJ0 367 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 PIGSQ96S52 555 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 KCNG1Q9UIX4 513 aa22■■□□□ 1.11
SHOX2-203ENST00000441443 RIMBP2O15034 1052 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 EPS8L3Q8TE67 593 aaKnown RBP21.99■■□□□ 1.11
SHOX2-203ENST00000441443 U2AF1L4Q8WU68 220 aaKnown RBP21.99■■□□□ 1.11
SHOX2-203ENST00000441443 ZDHHC18Q9NUE0 388 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 ENO4A6NNW6 628 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 H2AFZP0C0S5 128 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 BTDP43251 543 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 FXR2P51116 673 aaKnown RBP eCLIP21.99■■□□□ 1.11
SHOX2-203ENST00000441443 H2AFVQ71UI9 128 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 ERICH1Q86X53 443 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 MGARPQ8TDB4 240 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 UBA5Q9GZZ9 404 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 RAB17Q9H0T7 212 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 AJAP1Q9UKB5 411 aaPredicted RBP21.99■■□□□ 1.11
SHOX2-203ENST00000441443 DAAM1Q9Y4D1 1078 aa21.99■■□□□ 1.11
SHOX2-203ENST00000441443 CCDC169A6NNP5 214 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 FLOT1O75955 427 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 HERC4Q5GLZ8 1057 aaPredicted RBP21.98■■□□□ 1.11
SHOX2-203ENST00000441443 CAPRIN2Q6IMN6 1127 aaKnown RBP21.98■■□□□ 1.11
SHOX2-203ENST00000441443 SLFN11Q7Z7L1 901 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 CCHCR1Q8TD31 782 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 PGM2Q96G03 612 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 SEMA4AQ9H3S1 761 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 HDAC9Q9UKV0 1011 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 BIRC2Q13490 618 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 DCAF12L1Q5VU92 463 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 GJB7Q6PEY0 223 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 HES6Q96HZ4 224 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 ERP44Q9BS26 406 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 DBR1Q9UK59 544 aaKnown RBP21.98■■□□□ 1.11
SHOX2-203ENST00000441443 AMFRQ9UKV5 643 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 GNA14O95837 355 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 KRT16P08779 473 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 NUDT17P0C025 328 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 DUPD1Q68J44 220 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 SCFD1Q8WVM8 642 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 PPP1R9AQ9ULJ8 1098 aa21.98■■□□□ 1.11
SHOX2-203ENST00000441443 E9PMD0 336 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 EDIL3O43854 480 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 UPP2O95045 317 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 KLRC3Q07444 240 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 PICALMQ13492 652 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 MAEAQ7L5Y9 396 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 FAM167BQ9BTA0 163 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms