RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 CDK5RAP3Q96JB5 506 aa16.58■□□□□ 0.24
PLOD3-205ENST00000440925 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
PLOD3-205ENST00000440925 C7orf25Q9BPX7 421 aa16.58■□□□□ 0.24
PLOD3-205ENST00000440925 OSBPL7Q9BZF2 842 aa16.58■□□□□ 0.24
PLOD3-205ENST00000440925 STARD7Q9NQZ5 370 aa16.58■□□□□ 0.24
PLOD3-205ENST00000440925 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
PLOD3-205ENST00000440925 TRMT13Q9NUP7 481 aaKnown RBP16.58■□□□□ 0.24
PLOD3-205ENST00000440925 NRCAMQ92823 1304 aa16.58■□□□□ 0.24
PLOD3-205ENST00000440925 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
PLOD3-205ENST00000440925 RRN3P2A6NIE6 340 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 RSPH10B2B2RC85 870 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 RSPH10BP0C881 870 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 ARL2P36404 184 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 TXLNAP40222 546 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
PLOD3-205ENST00000440925 LRRC26Q2I0M4 334 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 CNNM4Q6P4Q7 775 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 SV2BQ7L1I2 683 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 BSNDQ8WZ55 320 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 BLZF1Q9H2G9 400 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 C11orf49Q9H6J7 331 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 PCDHA2Q9Y5H9 948 aa16.57■□□□□ 0.24
PLOD3-205ENST00000440925 TRIP12Q14669 1992 aaPredicted RBP16.57■□□□□ 0.24
PLOD3-205ENST00000440925 DNAH12Q6ZR08 3092 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 COL1A2P08123 1366 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 ARHGEF35A5YM69 484 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 B4GALT4O60513 344 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 SSBP05455 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
PLOD3-205ENST00000440925 PTPN11Q06124 597 aaPredicted RBP16.56■□□□□ 0.24
PLOD3-205ENST00000440925 RAD51AP2Q09MP3 1159 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 DPYDQ12882 1025 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 C1orf53Q5VUE5 145 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 EFCAB12Q6NXP0 572 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 MAEAQ7L5Y9 396 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 GPBP1Q86WP2 473 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 FAM126BQ8IXS8 530 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 ELOA2Q8IYF1 753 aaPredicted RBP16.56■□□□□ 0.24
PLOD3-205ENST00000440925 LRRC71Q8N4P6 559 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 DDX12PQ92771 950 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 TRIM9Q9C026 710 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
PLOD3-205ENST00000440925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
PLOD3-205ENST00000440925 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
PLOD3-205ENST00000440925 CAPN2P17655 700 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 GUCY2CP25092 1073 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 SARSP49591 514 aaKnown RBP16.55■□□□□ 0.24
PLOD3-205ENST00000440925 CLCN3P51790 818 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 PNOCQ13519 176 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 TRAF7Q6Q0C0 670 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 DYMQ7RTS9 669 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 ANKRD33Q7Z3H0 272 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 SERINC5Q86VE9 423 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 KSR1Q8IVT5 923 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 CNNM3Q8NE01 707 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 RASSF8Q8NHQ8 419 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 SPATA20Q8TB22 786 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 ASAP3Q8TDY4 903 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 FIZ1Q96SL8 496 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 TNMDQ9H2S6 317 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 SUGCTQ9HAC7 445 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 TMEM63CQ9P1W3 806 aa16.55■□□□□ 0.24
PLOD3-205ENST00000440925 FRMD3A2A2Y4 597 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 GOLGA6L22H0YM25 854 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 HIP1RO75146 1068 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 DGAT1O75907 488 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 RFC5P40937 340 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 TLE2Q04725 743 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 EHHADHQ08426 723 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 EMC2Q15006 297 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 CAMK4Q16566 473 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 PTGISQ16647 500 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 FAM47CQ5HY64 1035 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
PLOD3-205ENST00000440925 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 FGFBP2Q9BYJ0 223 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 CLSTN2Q9H4D0 955 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 PPME1Q9Y570 386 aa16.54■□□□□ 0.24
PLOD3-205ENST00000440925 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 CCDC85CA6NKD9 419 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 MAGEB2O15479 319 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 GTPBP6O43824 516 aaPredicted RBP16.53■□□□□ 0.24
PLOD3-205ENST00000440925 GPR32O75388 356 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 CYP2C9P11712 490 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 GLRA2P23416 452 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 ZNF131P52739 623 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 TBC1D8BQ0IIM8 1120 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 GPNMBQ14956 572 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 TRIM60Q495X7 471 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 NECAB2Q7Z6G3 386 aa16.53■□□□□ 0.24
PLOD3-205ENST00000440925 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms