RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PTGISQ16647 500 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 MCTP2Q6DN12 878 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 MAEAQ7L5Y9 396 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 NLRX1Q86UT6 975 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 TMEM139Q8IV31 216 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 METTL13Q8N6R0 699 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 PAGE5Q96GU1 130 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CSRNP2Q9H175 543 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 RNPEPQ9H4A4 650 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 C6orf50Q9HD87 102 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 PDLIM7Q9NR12 457 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 ARGLU1Q9NWB6 273 aaPredicted RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 SERTAD1Q9UHV2 236 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 PCDHB6Q9Y5E3 794 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 H3BRB1 525 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 TREHO43280 583 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 MYOGP15173 224 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 THPOP40225 353 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 RABGGTBP53611 331 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CYP4A11Q02928 519 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 ARHGAP1Q07960 439 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 DGKDQ16760 1214 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF658Q5TYW1 1059 aaPredicted RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 GDF6Q6KF10 455 aaPredicted RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 KRT25Q7Z3Z0 450 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 UBE2Q1Q7Z7E8 422 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 RETREG2Q8NC44 543 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC47Q96A33 483 aaKnown RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 MTMR8Q96EF0 704 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 BAG1Q99933 345 aaPredicted RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF577Q9BSK1 485 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 OSBPL7Q9BZF2 842 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 LRRC27Q9C0I9 530 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 TUT1Q9H6E5 874 aaKnown RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 FANCLQ9NW38 375 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CXXC1Q9P0U4 656 aaPredicted RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 NFE2L3Q9Y4A8 694 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 DNAH14Q0VDD8 3507 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 AKR1B15C9JRZ8 316 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ARVCFO00192 962 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ZEB2O60315 1214 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 COL6A1P12109 1028 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 BMP6P22004 513 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 EEF1GP26641 437 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 MCM7P33993 719 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 GJA9P57773 515 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 HIC1Q14526 733 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 TMEM266Q2M3C6 531 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 SWSAP1Q6NVH7 229 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 PDXDC2PQ6P474 469 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 TMTC1Q8IUR5 882 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 REXO1L1PQ8IX06 675 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 C17orf53Q8N3J3 647 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 KCTD17Q8N5Z5 321 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ATP6V0A1Q93050 837 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 WNT8BQ93098 351 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 RNPC3Q96LT9 517 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CLIC6Q96NY7 704 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 GLT8D2Q9H1C3 349 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 THAP9Q9H5L6 903 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 SUGCTQ9HAC7 445 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 A0A0U1RQG5 324 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 IPO5O00410 1097 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 WNT7AO00755 349 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC175P0C221 793 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 H2AFXP16104 143 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 GNA11P29992 359 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CDC25AP30304 524 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 PBX2P40425 430 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 STIM1Q13586 685 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 MFSD10Q14728 455 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC85BQ15834 202 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CEP55Q53EZ4 464 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CELF3Q5SZQ8 465 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC62Q6P9F0 684 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF365Q70YC5 407 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 APTXQ7Z2E3 356 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF467Q7Z7K2 595 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 FAM114A1Q8IWE2 563 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 C4orf32Q8N8J7 132 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 TC2NQ8N9U0 490 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 KLHDC9Q8NEP7 349 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 DHTKD1Q96HY7 919 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 SCLT1Q96NL6 688 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 PLIN2Q99541 437 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 NUP58Q9BVL2 599 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ZMYND12Q9H0C1 365 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 RIC8AQ9NPQ8 531 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 STK24Q9Y6E0 443 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 DMDP11532 3685 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 PPP1R3GB7ZBB8 358 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ZBTB39O15060 712 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 SLC37A4O43826 429 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 LGALS2P05162 132 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 CDK11BP21127 795 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 EDNRBP24530 442 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 RBM10P98175 930 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms