RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 KRT16P08779 473 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ERMARDQ5T6L9 678 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 KCNK18Q7Z418 384 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 GPBP1Q86WP2 473 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 TSC22D3Q99576 134 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 RASAL2Q9UJF2 1139 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 MEIS1O00470 390 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ZSCAN9O15535 394 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 IL2RBP14784 551 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 KCNJ1P48048 391 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 COASYQ13057 564 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ZNF572Q7Z3I7 529 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 ARMCX3Q9UH62 379 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-209ENST00000439886 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 CCDC188H7C350 402 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 RAD23BP54727 409 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 PLS1Q14651 629 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 AK8Q96MA6 479 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 LZTS2Q9BRK4 669 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 CTTNBP2NLQ9P2B4 639 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 MYH2Q9UKX2 1941 aa12.64□□□□□ -0.39
SMPD4-209ENST00000439886 H0YGN5 161 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 LRRN2O75325 713 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PAPOLAP51003 745 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 MECOMQ03112 1051 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 GRB10Q13322 594 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 UBE2SQ16763 222 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PIGBQ92521 554 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 TRIM7Q9C029 511 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 ARHGEF10LQ9HCE6 1279 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PAPOLBQ9NRJ5 636 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 HOMER3Q9NSC5 361 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 KLHL14Q9P2G3 628 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 FGFR2P21802 821 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 CD151P48509 253 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PDE6CP51160 858 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 SLC8A3P57103 927 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 TRIM28Q13263 835 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 TAOK1Q7L7X3 1001 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 TGFBRAP1Q8WUH2 860 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 ZNF570Q96NI8 536 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 NAGPAQ9UK23 515 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 RTCBQ9Y3I0 505 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PCDHGC5Q9Y5F6 944 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 EIF3BP55884 814 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 ANKRD20A2Q5SQ80 823 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 ANKRD20A1Q5TYW2 823 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 ANKRD20A3Q5VUR7 823 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 PLA2G12BQ9BX93 195 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 BATF3Q9NR55 127 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 ASIC3Q9UHC3 531 aa12.63□□□□□ -0.39
SMPD4-209ENST00000439886 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-209ENST00000439886 NOL4O94818 638 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 XRCC5P13010 732 aaKnown RBP12.62□□□□□ -0.39
SMPD4-209ENST00000439886 MSH2P43246 934 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 GALCP54803 685 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 CALCOCO2Q13137 446 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 MESDQ14696 234 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 MUM1Q2TAK8 710 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 P3H4Q92791 437 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 ARHGEF2Q92974 986 aaKnown RBP12.62□□□□□ -0.39
SMPD4-209ENST00000439886 C18orf8Q96DM3 657 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
SMPD4-209ENST00000439886 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 C5P01031 1676 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 CFAP73A6NFT4 308 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-209ENST00000439886 CREB1P16220 341 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 TNFAIP3P21580 790 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 ECHS1P30084 290 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 GBP1P32455 592 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-209ENST00000439886 TLDC1Q6P9B6 456 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 MTA3Q9BTC8 594 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 BLOC1S4Q9NUP1 217 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms