RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 USP28Q96RU2 1077 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 CELF4Q9BZC1 486 aaKnown RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 ZSCAN16Q9H4T2 348 aaPredicted RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 DHX33Q9H6R0 707 aaKnown RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 TUFT1Q9NNX1 390 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 CCT6AP40227 531 aaKnown RBP11.7□□□□□ -0.54
UBE2F-213ENST00000439780 CEBPZQ03701 1054 aaKnown RBP11.7□□□□□ -0.54
UBE2F-213ENST00000439780 KIZQ2M2Z5 673 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 IER5Q5VY09 327 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
UBE2F-213ENST00000439780 CNKSR3Q6P9H4 555 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 OTUD6AQ7L8S5 288 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 ERMNQ8TAM6 284 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 XPNPEP1Q9NQW7 623 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
UBE2F-213ENST00000439780 ANKEF1Q9NU02 776 aa11.7□□□□□ -0.54
UBE2F-213ENST00000439780 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
UBE2F-213ENST00000439780 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 F13A1P00488 732 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 RPLP2P05387 115 aaKnown RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 CD52P31358 61 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 RARRES1P49788 294 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 NLRP11P59045 1033 aaKnown RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 FOXD4L6Q3SYB3 417 aaPredicted RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 FOXD4L3Q6VB84 417 aaPredicted RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 KCNK18Q7Z418 384 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 SNX29Q8TEQ0 813 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 PNMA5Q96PV4 448 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 NACC1Q96RE7 527 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 AKT3Q9Y243 479 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 GINS2Q9Y248 185 aa11.69□□□□□ -0.54
UBE2F-213ENST00000439780 NOC2LQ9Y3T9 749 aaKnown RBP11.69□□□□□ -0.54
UBE2F-213ENST00000439780 ARID2Q68CP9 1835 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 BMP15O95972 392 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 ACTN1P12814 892 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 TMOD1P28289 359 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 RFC5P40937 340 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 GPC3P51654 580 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 CRYBB1P53674 252 aaPredicted RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 POLGP54098 1239 aaPredicted RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 WDR5P61964 334 aaKnown RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 DEFB103AP81534 67 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 IKBKEQ14164 716 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 BECN1Q14457 450 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 EMC2Q15006 297 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 TSHZ1Q6ZSZ6 1077 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 USP49Q70CQ1 688 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 SEPT8Q92599 483 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 CHAMP1Q96JM3 812 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 MAP7D2Q96T17 732 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 OSMRQ99650 979 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 IFIH1Q9BYX4 1025 aaKnown RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 DDX19AQ9NUU7 478 aaKnown RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 SUCLA2Q9P2R7 463 aaPredicted RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 FBXO2Q9UK22 296 aaPredicted RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
UBE2F-213ENST00000439780 PADI3Q9ULW8 664 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 PPME1Q9Y570 386 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 LOXHD1Q8IVV2 1947 aa11.68□□□□□ -0.54
UBE2F-213ENST00000439780 SZT2Q5T011 3432 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 PTPRSQ13332 1948 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
UBE2F-213ENST00000439780 ABHD14A-ACY1A0A1B0GW23 586 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
UBE2F-213ENST00000439780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.67□□□□□ -0.54
UBE2F-213ENST00000439780 E9PMD0 336 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 M0QZ92 97 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
UBE2F-213ENST00000439780 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 BRD1O95696 1058 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 MUTP22033 750 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 PBX2P40425 430 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
UBE2F-213ENST00000439780 RABGGTBP53611 331 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 GRB10Q13322 594 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 SLC39A14Q15043 492 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 HYIQ5T013 277 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 HAUS3Q68CZ6 603 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
UBE2F-213ENST00000439780 LINC01599Q8WXQ3 324 aa11.67□□□□□ -0.54
UBE2F-213ENST00000439780 SLC7A3Q8WY07 619 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms