RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 EPHX2P34913 555 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CASP4P49662 377 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 ZNF569Q5MCW4 686 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 RRAGAQ7L523 313 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 SLC17A8Q8NDX2 589 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 TMEM174Q8WUU8 243 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 ATP6V0A1Q93050 837 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CCDC42Q96M95 316 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 DRC1Q96MC2 740 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 MAP7D2Q96T17 732 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 AGPAT3Q9NRZ7 376 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 ARHGAP20Q9P2F6 1191 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 KCNH4Q9UQ05 1017 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 MRFAP1Q9Y605 127 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 LRRC37A2A6NM11 1700 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
SMAD3-202ENST00000439724 PSAPP07602 524 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
SMAD3-202ENST00000439724 PPIL2Q13356 520 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 TUBB2AQ13885 445 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 XKR9Q5GH70 373 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 GADL1Q6ZQY3 521 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMAD3-202ENST00000439724 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 FAM186BQ8IYM0 893 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 SLC35F6Q8N357 371 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 TUBB2BQ9BVA1 445 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 JPH1Q9HDC5 661 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-202ENST00000439724 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 CGNQ9P2M7 1197 aaKnown RBP12.92□□□□□ -0.34
SMAD3-202ENST00000439724 SLC9A2Q9UBY0 812 aa12.92□□□□□ -0.34
SMAD3-202ENST00000439724 KRT86O43790 486 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 STBD1O95210 358 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 ABL1P00519 1130 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 PLEKP08567 350 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-202ENST00000439724 KIF11P52732 1056 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 VAV2P52735 878 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 POLR2FP61218 127 aaKnown RBP12.91□□□□□ -0.34
SMAD3-202ENST00000439724 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
SMAD3-202ENST00000439724 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-202ENST00000439724 SPA17Q15506 151 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 STXBP2Q15833 593 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 SFMBT2Q5VUG0 894 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 DPY19L2P1Q6NXN4 242 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 ANO5Q75V66 913 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 OTUD6AQ7L8S5 288 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 KIAA1328Q86T90 577 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 KSR1Q8IVT5 923 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 JAKMIP2Q96AA8 810 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 HVCN1Q96D96 273 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 MYO6Q9UM54 1294 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 AGTPBP1Q9UPW5 1226 aa12.91□□□□□ -0.34
SMAD3-202ENST00000439724 CTAGE9A4FU28 777 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ZNF263O14978 683 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 EDNRBP24530 442 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 COPB2P35606 906 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 EIF4A3P38919 411 aaKnown RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ALDH5A1P51649 535 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 NCKAP1LP55160 1127 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ACTR2P61160 394 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 GTF2BQ00403 316 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 PPP2R5AQ15172 486 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 EXOC3L4Q17RC7 722 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 CCDC122Q5T0U0 273 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 CLMNQ96JQ2 1002 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 ASCC2Q9H1I8 757 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-202ENST00000439724 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 NLRC4Q9NPP4 1024 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 GABBR1Q9UBS5 961 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 FRMD4BQ9Y2L6 1034 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 IGSF9BQ9UPX0 1349 aa12.9□□□□□ -0.34
SMAD3-202ENST00000439724 TMEM150BA6NC51 233 aa12.89□□□□□ -0.35
SMAD3-202ENST00000439724 RBAK-RBAKDNI3L0D1 243 aa12.89□□□□□ -0.35
SMAD3-202ENST00000439724 ZNF862O60290 1169 aa12.89□□□□□ -0.35
SMAD3-202ENST00000439724 TLR2O60603 784 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms