RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NDUFAF2Q8N183 169 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZSWIM2Q8NEG5 633 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ADCY4Q8NFM4 1077 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 GJA10Q969M2 543 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 TBC1D20Q96BZ9 403 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 PAWRQ96IZ0 340 aaKnown RBP4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CDHR1Q96JP9 859 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 CENPOQ9BU64 300 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 C11orf84Q9BUA3 381 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 TRIM8Q9BZR9 551 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 DEF6Q9H4E7 631 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 PRDM11Q9NQV5 511 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 SLC5A4Q9NY91 659 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ACTR10Q9NZ32 417 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ABCF2Q9UG63 623 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 TSC22D4Q9Y3Q8 395 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNF451Q9Y4E5 1061 aa4.33□□□□□ -1.72
HMGB1P12-201ENST00000438594 NPEPPSL1A6NEC2 478 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 DDX3XO00571 662 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 RFPL3O75679 317 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 PHKG2P15735 406 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 RPL13P26373 211 aaKnown RBP4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 HOXC13P31276 330 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 ACVRL1P37023 503 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 RXRGP48443 463 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 SEPHS1P49903 392 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 STK3Q13188 491 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 GALEQ14376 348 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 ICAM4Q14773 271 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 FAM26FQ5R3K3 315 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 TTLL5Q6EMB2 1281 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 MZT2BQ6NZ67 158 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 EEPD1Q7L9B9 569 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 OR8H2Q8N162 312 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 NKAPQ8N5F7 415 aaKnown RBP4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 NKAIN3Q8N8D7 197 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 TXNDC5Q8NBS9 432 aaKnown RBP4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 CDK5RAP1Q96SZ6 601 aaKnown RBP4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNF747Q9BV97 191 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 KLC2Q9H0B6 622 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 CXorf56Q9H5V9 222 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 SH3GLB2Q9NR46 395 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 ODF2LQ9ULJ1 636 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 PPT2Q9UMR5 302 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 PHTF1Q9UMS5 762 aa4.32□□□□□ -1.72
HMGB1P12-201ENST00000438594 GABRDO14764 452 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 LAMTOR5O43504 91 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 VAMP4O75379 141 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 GJB6O95452 261 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 FUCA1P04066 466 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 NTRK1P04629 796 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 CYP1A1P04798 512 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 FAM153BP0C7A2 387 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 ECE1P42892 770 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 GIPRP48546 466 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 GRM3Q14832 879 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 ELF2Q15723 593 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 PPP2R5EQ16537 467 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 COBLL1Q53SF7 1204 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 PRAMEF18Q5VWM3 479 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 EEF1DP3Q658K8 133 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 INTS3Q68E01 1043 aaKnown RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 XRRA1Q6P2D8 792 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 C1orf228Q6PIY5 440 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 ETV3LQ6ZN32 361 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 RPAINQ86UA6 219 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 PNMA8AQ86V59 439 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 TPH2Q8IWU9 490 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 LMNTD2Q8IXW0 634 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 FAM26EQ8N5C1 309 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 LINC00482Q8N8I6 264 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 KYQ8NBH2 561 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 IL17REQ8NFR9 667 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 CCDC47Q96A33 483 aaKnown RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNF496Q96IT1 587 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 LCORQ96JN0 433 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 FERD3LQ96RJ6 166 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 EIF2AK1Q9BQI3 630 aaKnown RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 TARS2Q9BW92 718 aaKnown RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 OSBPL5Q9H0X9 879 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 CD248Q9HCU0 757 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 PCDHGB3Q9Y5G1 929 aa4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 SETD1BQ9UPS6 1966 aaKnown RBP4.31□□□□□ -1.72
HMGB1P12-201ENST00000438594 TNKSO95271 1327 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 WASHC2AQ641Q2 1341 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 SYNRGQ9UMZ2 1314 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 ABHD14A-ACY1A0A1B0GW23 586 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PABPN1LA6NDY0 278 aaKnown RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PPP1R11O60927 126 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 SLC5A1P13866 664 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 GLULP15104 373 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 ADD2P35612 726 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 FLT3P36888 993 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 TBX2Q13207 712 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PDE1CQ14123 709 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 GBX1Q14549 363 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 SAFBQ15424 915 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 CDSNQ15517 529 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms