RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 PTPRHQ9HD43 1115 aa7.6□□□□□ -1.19
SPEN-202ENST00000438066 C1GALT1Q9NS00 363 aa7.6□□□□□ -1.19
SPEN-202ENST00000438066 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
SPEN-202ENST00000438066 SCN11AQ9UI33 1791 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 KLHL33A6NCF5 533 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 GOLGA8AA7E2F4 631 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 GOLGA8BA8MQT2 603 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 GNAT3A8MTJ3 354 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 H7C1D1 291 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 PDE6AP16499 860 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 SLC9A1P19634 815 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 KIR3DL1P43629 444 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 TNK2Q07912 1038 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 GALEQ14376 348 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 TERF2Q15554 542 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 GRIK4Q16099 956 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 CRY1Q16526 586 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 ARHGAP44Q17R89 818 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 BRINP3Q76B58 766 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 SKAP1Q86WV1 359 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 CPNE8Q86YQ8 564 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 TMEM57Q8N5G2 664 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 USHBP1Q8N6Y0 703 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 ENOX1Q8TC92 643 aaKnown RBP7.59□□□□□ -1.19
SPEN-202ENST00000438066 RTF1Q92541 710 aaKnown RBP7.59□□□□□ -1.19
SPEN-202ENST00000438066 DDX17Q92841 729 aaKnown RBP7.59□□□□□ -1.19
SPEN-202ENST00000438066 CEP41Q9BYV8 373 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 MAN1C1Q9NR34 630 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 FBXL7Q9UJT9 491 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 DDX19BQ9UMR2 479 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 SPATA31A3Q5VYP0 1347 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 CPDO75976 1380 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.19
SPEN-202ENST00000438066 ELL2O00472 640 aaPredicted RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 LCE2BO14633 110 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 KCNK3O14649 394 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 KRT15P19012 456 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 KRT85P78386 507 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 RBM10P98175 930 aaKnown RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 KRT24Q2M2I5 525 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 GRAMD1BQ3KR37 738 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 OSTM1Q86WC4 334 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 NEDD1Q8NHV4 660 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 LRRC59Q96AG4 307 aaKnown RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 SCYL1Q96KG9 808 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 UBL7Q96S82 380 aaPredicted RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 NUP88Q99567 741 aaPredicted RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 ATG3Q9NT62 314 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 ZBTB40Q9NUA8 1239 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 USP21Q9UK80 565 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 NOC2LQ9Y3T9 749 aaKnown RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 PARP4Q9UKK3 1724 aaKnown RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 GPR3P46089 330 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 IFIT1BQ5T764 474 aaKnown RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 Q6ZNB5 142 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.58□□□□□ -1.2
SPEN-202ENST00000438066 OTOP1Q7RTM1 612 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 RASSF3Q86WH2 238 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 ITPRIPQ8IWB1 547 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 IL17REQ8NFR9 667 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 TGFBRAP1Q8WUH2 860 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 MMP19Q99542 508 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 BOCQ9BWV1 1114 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 NMRK2Q9NPI5 230 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 BABAM1Q9NWV8 329 aa7.58□□□□□ -1.2
SPEN-202ENST00000438066 FAM95CA0A1B0GW59 222 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 ANO9A1A5B4 782 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 LCHNA4D1U4 455 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 AP1G1O43747 822 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 MYO1BO43795 1136 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 ZRANB2O95218 330 aaKnown RBP eCLIP7.57□□□□□ -1.2
SPEN-202ENST00000438066 MYBP10242 640 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 BMP3P12645 472 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 LAPTM5Q13571 262 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 RTP2Q5QGT7 225 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 GPR158Q5T848 1215 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 PARD3BQ8TEW8 1205 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 TTC17Q96AE7 1141 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 TEKT5Q96M29 485 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 STRBPQ96SI9 672 aaKnown RBP7.57□□□□□ -1.2
SPEN-202ENST00000438066 ELF4Q99607 663 aaPredicted RBP7.57□□□□□ -1.2
SPEN-202ENST00000438066 JAM3Q9BX67 310 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 TOMM22Q9NS69 142 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 PUF60Q9UHX1 559 aaKnown RBP7.57□□□□□ -1.2
SPEN-202ENST00000438066 TSPYL4Q9UJ04 414 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 SPO11Q9Y5K1 396 aa7.57□□□□□ -1.2
SPEN-202ENST00000438066 SOS1Q07889 1333 aaPredicted RBP7.57□□□□□ -1.2
SPEN-202ENST00000438066 SYPP08247 313 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 PHKG2P15735 406 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 HSPA6P17066 643 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 VCAM1P19320 739 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 MAP4P27816 1152 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 TPP2P29144 1249 aaPredicted RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 JAM2P57087 298 aa7.56□□□□□ -1.2
SPEN-202ENST00000438066 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
SPEN-202ENST00000438066 IRF9Q00978 393 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms