RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 NID2Q14112 1375 aa17.13■□□□□ 0.33
DDR1-237ENST00000437124 PLXNA4Q9HCM2 1894 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 ZNF292O60281 2723 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 IGKV6D-21A0A0A0MT36 114 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 FAM86B1E9PN63 330 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 PER2O15055 1255 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 CCNE2O96020 404 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 PDGFBP01127 241 aaPredicted RBP17.12■□□□□ 0.33
DDR1-237ENST00000437124 CYP3A4P08684 503 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 FAM86B2P0C5J1 330 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 ZNF76P36508 570 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
DDR1-237ENST00000437124 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 ABHD15Q6UXT9 468 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 UBALD2Q8IYN6 164 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 MICAL1Q8TDZ2 1067 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 ZMYND12Q9H0C1 365 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 AAASQ9NRG9 546 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
DDR1-237ENST00000437124 KDM3AQ9Y4C1 1321 aa17.12■□□□□ 0.33
DDR1-237ENST00000437124 IGLV3-22A0A075B6J6 115 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 FSCN2O14926 492 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
DDR1-237ENST00000437124 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
DDR1-237ENST00000437124 HOXB8P17481 243 aaPredicted RBP17.11■□□□□ 0.33
DDR1-237ENST00000437124 RPS6KB1P23443 525 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 SARSP49591 514 aaKnown RBP17.11■□□□□ 0.33
DDR1-237ENST00000437124 SLC26A2P50443 739 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 PAK2Q13177 524 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 TRPV2Q9Y5S1 764 aa17.11■□□□□ 0.33
DDR1-237ENST00000437124 SMIM35A0A1B0GVV1 85 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 M0QZ92 97 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 DDX39AO00148 427 aaKnown RBP17.1■□□□□ 0.33
DDR1-237ENST00000437124 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 FGF18O76093 207 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 GATMP50440 423 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 ERVFC1P60507 584 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 MTMR3Q13615 1198 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 ANKRD54Q6NXT1 300 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 SYCE2Q6PIF2 218 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 MTHFD1LQ6UB35 978 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 ZBTB33Q86T24 672 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 CELF4Q9BZC1 486 aaKnown RBP17.1■□□□□ 0.33
DDR1-237ENST00000437124 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 SORCS3Q9UPU3 1222 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
DDR1-237ENST00000437124 IPO5O00410 1097 aaKnown RBP17.09■□□□□ 0.33
DDR1-237ENST00000437124 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 NTRK3Q16288 839 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
DDR1-237ENST00000437124 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
DDR1-237ENST00000437124 NME8Q8N427 588 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 KREMEN2Q8NCW0 462 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 CCDC12Q8WUD4 166 aaPredicted RBP17.09■□□□□ 0.33
DDR1-237ENST00000437124 PHKBQ93100 1093 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 PCDHB7Q9Y5E2 793 aa17.09■□□□□ 0.33
DDR1-237ENST00000437124 BACH1O14867 736 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 HBP1O60381 514 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 REC8O95072 547 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 KLRC1P26715 233 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 PSMA5P28066 241 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 GNA11P29992 359 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 TECP42680 631 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 EVCP57679 992 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 PLCB3Q01970 1234 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 TMEM105Q8N8V8 129 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 ZNF577Q9BSK1 485 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
DDR1-237ENST00000437124 ZBTB42B2RXF5 422 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 IFNAR1P17181 557 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 ATP4AP20648 1035 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 KRT76Q01546 638 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
DDR1-237ENST00000437124 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 THNSL1Q8IYQ7 743 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 COLGALT1Q8NBJ5 622 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
DDR1-237ENST00000437124 NECTIN4Q96NY8 510 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 RNF26Q9BY78 433 aaPredicted RBP17.07■□□□□ 0.32
DDR1-237ENST00000437124 NGRNQ9NPE2 291 aaKnown RBP17.07■□□□□ 0.32
DDR1-237ENST00000437124 RGS18Q9NS28 235 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 C1orf112Q9NSG2 853 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
DDR1-237ENST00000437124 COL1A2P08123 1366 aa17.06■□□□□ 0.32
DDR1-237ENST00000437124 BRD1O95696 1058 aa17.06■□□□□ 0.32
DDR1-237ENST00000437124 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
DDR1-237ENST00000437124 CIITAP33076 1130 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms