RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PFDN1O60925 122 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 PLCG2P16885 1265 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 MYLK2Q9H1R3 596 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 RNF41Q9H4P4 317 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 GREM2Q9H772 168 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 SEPT10Q9P0V9 454 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 NOL4O94818 638 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 CCNFP41002 786 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 MAGEA10P43363 369 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 DBN1Q16643 649 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 SPTY2D1Q68D10 685 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ACTRT1Q8TDG2 376 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 U2AF1L4Q8WU68 220 aaKnown RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ABCC12Q96J65 1359 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 FMN2Q9NZ56 1722 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 TMEM110-MUSTN1A8MSY1 372 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 UNC5CO95185 931 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 CACNB1Q02641 598 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 AUHQ13825 339 aaKnown RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 SETDB1Q15047 1291 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 EAPPQ56P03 285 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ASRGL1Q7L266 308 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 TAOK1Q7L7X3 1001 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 C4orf32Q8N8J7 132 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 PGM2Q96G03 612 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 TBC1D10AQ9BXI6 508 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 DENND2DQ9H6A0 471 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 OSGEPQ9NPF4 335 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 TCRBV5S4A2TA0A5A2 114 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 AGTP01019 485 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 TXKP42681 527 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 SEC23AQ15436 765 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 TMTC3Q6ZXV5 915 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ZNF571Q7Z3V5 609 aaPredicted RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ERP44Q9BS26 406 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 KIAA1683Q9H0B3 1180 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 FGFR1OPO95684 399 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 BRAFP15056 766 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 DIXDC1Q155Q3 683 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CENPPQ6IPU0 288 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 HEATR3Q7Z4Q2 680 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ZFAND2BQ8WV99 257 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SPOCK2Q92563 424 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 PITPNM3Q9BZ71 974 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CPVLQ9H3G5 476 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SLITRK6Q9H5Y7 841 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 PHF8Q9UPP1 1060 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 MYH2Q9UKX2 1941 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 GCP02774 474 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 DESP17661 470 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CYP7A1P22680 504 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 KCNJ1P48048 391 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 MCL1Q07820 350 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 TROAPQ12815 778 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ARL6IP4Q66PJ3 421 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 OR52E8Q6IFG1 317 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ANKLE1Q8NAG6 615 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 TPCN2Q8NHX9 752 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 TBC1D16Q8TBP0 767 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 C18orf8Q96DM3 657 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 MRRFQ96E11 262 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CEP72Q9P209 647 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ZSCAN9O15535 394 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 FAM163BP0C2L3 166 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 MPP2Q14168 576 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 RCN1Q15293 331 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SNX30Q5VWJ9 437 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SRRM1Q8IYB3 904 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SNRNP27Q8WVK2 155 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ABTB1Q969K4 478 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 OPTNQ96CV9 577 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 RTL9Q8NET4 1388 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 MYMKA6NI61 221 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 AFPP02771 609 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 DNAJC3Q13217 504 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 LBRQ14739 615 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CHRNA2Q15822 529 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 KHDC1Q4VXA5 237 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 TCERG1LQ5VWI1 586 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 NCAPG2Q86XI2 1143 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 JAMLQ86YT9 394 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SPATA5Q8NB90 893 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 WDR66Q8TBY9 1149 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CCNT1O60563 726 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 MYL1P05976 194 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SLC9A1P19634 815 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 RASGRF1Q13972 1273 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ALX1Q15699 326 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 KIAA1755Q5JYT7 1200 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 RFWD3Q6PCD5 774 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 SCG3Q8WXD2 468 aaKnown RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 ARMCX3Q9UH62 379 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 CHORDC1Q9UHD1 332 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-202ENST00000435070 AMFRQ9UKV5 643 aa8.04□□□□□ -1.12
CPSF6-202ENST00000435070 VPS41P49754 854 aa8.03□□□□□ -1.12
CPSF6-202ENST00000435070 ACBD5Q5T8D3 534 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms