RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 LMAN1P49257 510 aa20.33■□□□□ 0.85
CLK1-205ENST00000434813 ENOX2Q16206 610 aaKnown RBP20.33■□□□□ 0.85
CLK1-205ENST00000434813 ZNF577Q9BSK1 485 aa20.33■□□□□ 0.85
CLK1-205ENST00000434813 RBM12Q9NTZ6 932 aaKnown RBP20.33■□□□□ 0.85
CLK1-205ENST00000434813 CALCOCO1Q9P1Z2 691 aa20.33■□□□□ 0.85
CLK1-205ENST00000434813 NENFQ9UMX5 172 aa20.33■□□□□ 0.85
CLK1-205ENST00000434813 SFI1A8K8P3 1242 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 FTCDO95954 541 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 PSMC2P35998 433 aaKnown RBP20.32■□□□□ 0.84
CLK1-205ENST00000434813 UBXN2AP68543 259 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 C8orf74Q6P047 294 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 FAM186BQ8IYM0 893 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 UNC45AQ9H3U1 944 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 POLD4Q9HCU8 107 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 PCDHB13Q9Y5F0 798 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 BRCA1P38398 1863 aaKnown RBP20.32■□□□□ 0.84
CLK1-205ENST00000434813 PPP1R12BO60237 982 aaPredicted RBP20.32■□□□□ 0.84
CLK1-205ENST00000434813 MATR3P43243 847 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLK1-205ENST00000434813 STXBP4Q6ZWJ1 553 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 TEKT3Q9BXF9 490 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 WRAP73Q9P2S5 460 aaPredicted RBP20.32■□□□□ 0.84
CLK1-205ENST00000434813 NAGPAQ9UK23 515 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 FER1L6Q2WGJ9 1857 aa20.32■□□□□ 0.84
CLK1-205ENST00000434813 CES2O00748 559 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 RNF40O75150 1001 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 FLOT1O75955 427 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 ARP10275 920 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 CAP2P40123 477 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 ZC2HC1CQ53FD0 456 aaPredicted RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 FAM83AQ86UY5 434 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 NEK9Q8TD19 979 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 MS4A14Q96JA4 679 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 INPP4AQ96PE3 977 aaPredicted RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 FHDC1Q9C0D6 1143 aaPredicted RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 AJAP1Q9UKB5 411 aaPredicted RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 ZBTB39O15060 712 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 GUCY2CP25092 1073 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 ZYXQ15942 572 aaKnown RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 IFI16Q16666 785 aaKnown RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 ZNF720Q7Z2F6 126 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 CDAN1Q8IWY9 1227 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 FAM178BQ8IXR5 827 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 GDAP1L1Q96MZ0 367 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 RIT2Q99578 217 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 TMEM39BQ9GZU3 492 aa20.31■□□□□ 0.84
CLK1-205ENST00000434813 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.31■□□□□ 0.84
CLK1-205ENST00000434813 LTBP3Q9NS15 1303 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 WNT10BO00744 389 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 PHACTR2O75167 634 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 RPS12P25398 132 aaKnown RBP20.3■□□□□ 0.84
CLK1-205ENST00000434813 HSD17B4P51659 736 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 EPHB4P54760 987 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 MUM1L1Q5H9M0 696 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 ALKBH5Q6P6C2 394 aaKnown RBP20.3■□□□□ 0.84
CLK1-205ENST00000434813 EMBQ6PCB8 327 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 HS2ST1Q7LGA3 356 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 VPS36Q86VN1 386 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 LXNQ9BS40 222 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 FBXO28Q9NVF7 368 aa20.3■□□□□ 0.84
CLK1-205ENST00000434813 IPO5O00410 1097 aaKnown RBP20.29■□□□□ 0.84
CLK1-205ENST00000434813 FERP16591 822 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 ZBTB9Q96C00 473 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 MXRA8Q9BRK3 442 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 IKZF4Q9H2S9 585 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 FAM204AQ9H8W3 233 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 AGPAT3Q9NRZ7 376 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 DMAC2Q9NW81 257 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 RPTORQ8N122 1335 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 ICAM1P05362 532 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 BCRP11274 1271 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 SLC7A5Q01650 507 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 NBPF9Q3BBW0 867 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 SND1Q7KZF4 910 aaKnown RBP eCLIP20.29■□□□□ 0.84
CLK1-205ENST00000434813 GOLGA5Q8TBA6 731 aa20.29■□□□□ 0.84
CLK1-205ENST00000434813 AGPSO00116 658 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 GFPT2O94808 682 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 GGCXP38435 758 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 FMO5P49326 533 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 HNRNPH2P55795 449 aaKnown RBP20.28■□□□□ 0.84
CLK1-205ENST00000434813 PPP2R5AQ15172 486 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 ODR4Q5SWX8 454 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 LRRC57Q8N9N7 239 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 CAVIN3Q969G5 261 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
CLK1-205ENST00000434813 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 INTUQ9ULD6 942 aa20.28■□□□□ 0.84
CLK1-205ENST00000434813 A0A0A6YYK5 440 aaPredicted RBP20.27■□□□□ 0.84
CLK1-205ENST00000434813 GOLGA6BA6NDN3 693 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 PPP1R37O75864 691 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 ASNSP08243 561 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 STAT1P42224 750 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 MAP3K10Q02779 954 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 COG2Q14746 738 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 GJB7Q6PEY0 223 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 MIGA2Q7L4E1 593 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 ZBED3Q96IU2 234 aaPredicted RBP20.27■□□□□ 0.84
CLK1-205ENST00000434813 SYT17Q9BSW7 474 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 STRA6Q9BX79 667 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms