RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TRIM10Q9UDY6 481 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 TFR2Q9UP52 801 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 PCDHA10Q9Y5I2 948 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 NFASCO94856 1347 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 EIF3CLB5ME19 914 aaKnown RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 SP4Q02446 784 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 PPP2R3AQ06190 1150 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 CDHR1Q96JP9 859 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 EIF3CQ99613 913 aaKnown RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 PAGR1Q9BTK6 254 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 GBP3Q9H0R5 595 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 METTL14Q9HCE5 456 aaKnown RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 JPH1Q9HDC5 661 aaPredicted RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 AGPAT3Q9NRZ7 376 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 ANKEF1Q9NU02 776 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 LARSQ9P2J5 1176 aaKnown RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 GABBR1Q9UBS5 961 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 ZNFX1Q9P2E3 1918 aaKnown RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 STAM2O75886 525 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 POLR2FP61218 127 aaKnown RBP21.47■■□□□ 1.03
VRK2-205ENST00000432057 FSTL1Q12841 308 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 TCERG1LQ5VWI1 586 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 HS2ST1Q7LGA3 356 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 FAM186BQ8IYM0 893 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 SLC35F6Q8N357 371 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 SPATC1LQ9H0A9 340 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 GANQ9H2C0 597 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 GPRC5CQ9NQ84 441 aa21.47■■□□□ 1.03
VRK2-205ENST00000432057 PFASO15067 1338 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 SPATA31C2B4DYI2 1134 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 PLS3P13797 630 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 CYP2J2P51589 502 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 KRT83P78385 493 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 ANO5Q75V66 913 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 SMAP1Q8IYB5 467 aaPredicted RBP21.46■■□□□ 1.03
VRK2-205ENST00000432057 ZC3H15Q8WU90 426 aaKnown RBP21.46■■□□□ 1.03
VRK2-205ENST00000432057 SLC35C1Q96A29 364 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 ASCC2Q9H1I8 757 aaPredicted RBP21.46■■□□□ 1.03
VRK2-205ENST00000432057 SLC9A2Q9UBY0 812 aa21.46■■□□□ 1.03
VRK2-205ENST00000432057 ZNF862O60290 1169 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 GRIN3BO60391 1043 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 ALDH5A1P51649 535 aaPredicted RBP21.45■■□□□ 1.02
VRK2-205ENST00000432057 EAPPQ56P03 285 aaPredicted RBP21.45■■□□□ 1.02
VRK2-205ENST00000432057 KIAA1328Q86T90 577 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 NCAPG2Q86XI2 1143 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 SYCP3Q8IZU3 236 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 DNERQ8NFT8 737 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 ANKRD7Q92527 254 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 BORCS6Q96GS4 357 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 CCDC42Q96M95 316 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 IWS1Q96ST2 819 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 FBXO40Q9UH90 709 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 MCM3APO60318 1980 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 CXCL11O14625 94 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 ZNF263O14978 683 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 CNMDO75829 334 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 MAPTP10636 758 aaKnown RBP21.45■■□□□ 1.02
VRK2-205ENST00000432057 PSMC2P35998 433 aaKnown RBP21.45■■□□□ 1.02
VRK2-205ENST00000432057 EIF4A3P38919 411 aaKnown RBP21.45■■□□□ 1.02
VRK2-205ENST00000432057 CYP27A1Q02318 531 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 PPIL2Q13356 520 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 STXBP2Q15833 593 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 DRC1Q96MC2 740 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 TIPINQ9BVW5 301 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 DMAC2Q9NW81 257 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 GUCA1BQ9UMX6 200 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 KCNH4Q9UQ05 1017 aa21.45■■□□□ 1.02
VRK2-205ENST00000432057 ZC3H4Q9UPT8 1303 aaKnown RBP21.44■■□□□ 1.02
VRK2-205ENST00000432057 IPO7O95373 1038 aaKnown RBP21.44■■□□□ 1.02
VRK2-205ENST00000432057 PSAPP07602 524 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 ACTN1P12814 892 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 SLC9A1P19634 815 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 ACTR2P61160 394 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 SP2Q02086 613 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 FAM102BQ5T8I3 360 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 SWSAP1Q6NVH7 229 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 CCDC60Q8IWA6 550 aaPredicted RBP21.44■■□□□ 1.02
VRK2-205ENST00000432057 JAKMIP2Q96AA8 810 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 OPTNQ96CV9 577 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 HAUS4Q9H6D7 363 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 AGTPBP1Q9UPW5 1226 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 MRFAP1Q9Y605 127 aa21.44■■□□□ 1.02
VRK2-205ENST00000432057 RCCD1A6NED2 376 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 KIF11P52732 1056 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 ALCAMQ13740 583 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 CCDC122Q5T0U0 273 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 DPY19L2P1Q6NXN4 242 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 GOLGA5Q8TBA6 731 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 ATP6V0A1Q93050 837 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 MKNK1Q9BUB5 465 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 R3HDMLQ9H3Y0 253 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 TLR2O60603 784 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 EIF3JO75822 258 aaKnown RBP21.43■■□□□ 1.02
VRK2-205ENST00000432057 STBD1O95210 358 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 PEX3P56589 373 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 MOGSQ13724 837 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 SFMBT2Q5VUG0 894 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 HGSNATQ68CP4 663 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms