RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 PWP2Q15269 919 aaKnown RBP12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 CHEK2O96017 543 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 KLC2Q9H0B6 622 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 CLRN2A0PK11 232 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 SPHKAPQ2M3C7 1700 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 OCA2Q04671 838 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 TTC1Q99614 292 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 RFX1P22670 979 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 KCNA1Q09470 495 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 PRPF3O43395 683 aaKnown RBP12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 EP400NLQ6ZTU2 488 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 SIX6OS1Q8N1H7 587 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
RIMKLA-202ENST00000431473 KRT37O76014 449 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 GCFC2P16383 781 aaKnown RBP12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 MORF4L2Q15014 288 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 LRRC4Q9HBW1 653 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 IRAK4Q9NWZ3 460 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 ZBTB22O15209 634 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 KRT14P02533 472 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 GPS1Q13098 491 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 SLFNL1Q499Z3 407 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 BBS5Q8N3I7 341 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 FSCBQ5H9T9 825 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 SARM1Q6SZW1 724 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 ACAD11Q709F0 780 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 NLRP4Q96MN2 994 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 NOC2LQ9Y3T9 749 aaKnown RBP12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 CCDC85BQ15834 202 aaPredicted RBP12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 MDH1BQ5I0G3 518 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 FSD1LQ9BXM9 530 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 ARL4CP56559 192 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 COPS2P61201 443 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 SEPT8Q92599 483 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 CEP72Q9P209 647 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 ZNF711Q9Y462 761 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 FGFR4P22455 802 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 EPHB1P54762 984 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 SEC31BQ9NQW1 1179 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 STOML1Q9UBI4 398 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 HNRNPCP07910 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 PAMP19021 973 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 EEPD1Q7L9B9 569 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 CATSPER3Q86XQ3 398 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 BPIFA3Q9BQP9 254 aa12.53□□□□□ -0.4
RIMKLA-202ENST00000431473 PSMC1P62191 440 aaKnown RBP12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 ERICH1Q86X53 443 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 ARL8AQ96BM9 186 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 NDE1Q9NXR1 346 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 STK32BQ9NY57 414 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 SLC12A6Q9UHW9 1150 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 CCDC188H7C350 402 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 ZNF185O15231 689 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 TAC1P20366 129 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 GIPC2Q8TF65 315 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 MS4A14Q96JA4 679 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 TAF1DQ9H5J8 278 aaPredicted RBP12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 TCP11X1B4DZS4 312 aa12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.4
RIMKLA-202ENST00000431473 LGALS16A8MUM7 142 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 PPP4R4Q6NUP7 873 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 LBHD1Q9BQE6 289 aaPredicted RBP12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 MSTO1Q9BUK6 570 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 NBPF10Q6P3W6 841 aaKnown RBP12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 TRMT2AQ8IZ69 625 aaKnown RBP12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 DIS3Q9Y2L1 958 aaKnown RBP12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 POTEMA6NI47 508 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 SEMA3EO15041 775 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 HSPA2P54652 639 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 PEX3P56589 373 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 MARCH10Q8NA82 808 aaPredicted RBP12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 KCNA4P22459 653 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms