RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 KRT6CP48668 564 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 ANKRD49Q8WVL7 239 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 QKIQ96PU8 341 aaKnown RBP eCLIP17.53■□□□□ 0.48e-12■■■■■ 36.7
RIF1-204ENST00000430328 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 hCG_1642624A0A1W2PR95 340 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 FTCDO95954 541 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 LRRC74AQ0VAA2 488 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 KLHL24Q6TFL4 600 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 NARS2Q96I59 477 aaKnown RBP17.53■□□□□ 0.4
RIF1-204ENST00000430328 CCDC134Q9H6E4 229 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 RWDD3Q9Y3V2 267 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 KIAA1755Q5JYT7 1200 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 EGFL8Q99944 293 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 PDCD10Q9BUL8 212 aa17.53■□□□□ 0.4
RIF1-204ENST00000430328 PSMA4P25789 261 aaKnown RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 ARMCX4Q5H9R4 360 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.52■□□□□ 0.47e-7■■■□□ 16.4
RIF1-204ENST00000430328 KLHL8Q9P2G9 620 aaPredicted RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 DNALI1O14645 258 aaPredicted RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 AKAP10O43572 662 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 STRNO43815 780 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 TMEM154Q6P9G4 183 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 MICU2Q8IYU8 434 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 PNMA6AP0CW24 399 aaPredicted RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 PRAMEP78395 509 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 RBL2Q08999 1139 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 NRBP2Q9NSY0 501 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 ADAM21Q9UKJ8 722 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 CMA1P23946 247 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 MAGOHP61326 146 aaKnown RBP17.52■□□□□ 0.4
RIF1-204ENST00000430328 DAB2IPQ5VWQ8 1189 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 CUEDC2Q9H467 287 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 HPS5Q9UPZ3 1129 aa17.52■□□□□ 0.4
RIF1-204ENST00000430328 FAM45BPQ6NSW5 357 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 C11orf88Q6PI97 169 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 ARMCX2Q7L311 632 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 SARS2Q9NP81 518 aaKnown RBP17.52■□□□□ 0.39
RIF1-204ENST00000430328 BNIP3LO60238 219 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 JAK2O60674 1132 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 PDE6BP35913 854 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 CTDSPL2Q05D32 466 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 CSTF3Q12996 717 aaKnown RBP17.52■□□□□ 0.39
RIF1-204ENST00000430328 NFRKBQ6P4R8 1299 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 CXorf56Q9H5V9 222 aa17.52■□□□□ 0.39
RIF1-204ENST00000430328 RSPH1Q8WYR4 309 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 CENPTQ96BT3 561 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 CCDC188H7C350 402 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 RNF103O00237 685 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 HSPA2P54652 639 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
RIF1-204ENST00000430328 OSBPL9Q96SU4 736 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 CYP26B1Q9NR63 512 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 SNPHO15079 494 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 POLR2MP0CAP2 368 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 PPP2R2AP63151 447 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 TERF2Q15554 542 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 AKT3Q9Y243 479 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 CLCA2Q9UQC9 943 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 UFL1O94874 794 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 CCT7Q99832 543 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 SEPT9Q9UHD8 586 aaPredicted RBP17.51■□□□□ 0.39
RIF1-204ENST00000430328 RAB42Q8N4Z0 105 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
RIF1-204ENST00000430328 PCDHA13Q9Y5I0 950 aa17.51■□□□□ 0.39
RIF1-204ENST00000430328 CFAP69A5D8W1 941 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 ZNF839A8K0R7 811 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 ANKRD65E5RJM6 399 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 HEATR4Q86WZ0 1026 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 OLFM1Q99784 485 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 EHBP1L1Q8N3D4 1523 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 MAN2A1Q16706 1144 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 SLC13A1Q9BZW2 595 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 AOX1Q06278 1338 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 C19orf18Q8NEA5 215 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 TRIM49P0CI25 452 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 TRIM49CP0CI26 452 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
RIF1-204ENST00000430328 AP1S2P56377 157 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 TRADDQ15628 312 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 SARM1Q6SZW1 724 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 SH3KBP1Q96B97 665 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 PDE5AO76074 875 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 GAP43P17677 238 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 TRIM25Q14258 630 aaKnown RBP17.5■□□□□ 0.39
RIF1-204ENST00000430328 MRPL1Q9BYD6 325 aaKnown RBP17.5■□□□□ 0.39
RIF1-204ENST00000430328 CFTRP13569 1480 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 NDUFA8P51970 172 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 TCP10Q12799 353 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 SPDYE7PQ495Y7 208 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms