RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ARSHQ5FYA8 562 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 C1orf186Q6ZWK4 172 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 CCDC65Q8IXS2 484 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 ELOA2Q8IYF1 753 aaPredicted RBP8.78□□□□□ -1
HMGA1P4-201ENST00000428643 MCPH1Q8NEM0 835 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 U2AF1L4Q8WU68 220 aaKnown RBP8.78□□□□□ -1
HMGA1P4-201ENST00000428643 LMBR1Q8WVP7 490 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 DRC1Q96MC2 740 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 GLT1D1Q96MS3 346 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 C7orf25Q9BPX7 421 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 JPH2Q9BR39 696 aaPredicted RBP8.78□□□□□ -1
HMGA1P4-201ENST00000428643 TSEN34Q9BSV6 310 aaKnown RBP8.78□□□□□ -1
HMGA1P4-201ENST00000428643 TIPINQ9BVW5 301 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 POLR3FQ9H1D9 316 aaPredicted RBP8.78□□□□□ -1
HMGA1P4-201ENST00000428643 PANK4Q9NVE7 773 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 RMND1Q9NWS8 449 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 PCDHA5Q9Y5H7 936 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 TCHHQ07283 1943 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 NRCAMQ92823 1304 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 HTTP42858 3142 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 DOCK5Q9H7D0 1870 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 A0A1W2PQ45 241 aaPredicted RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 A0A1W2PQY0 241 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 C17orf102A2RUQ5 167 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 HAS3O00219 553 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 GAS2O43903 313 aaKnown RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 LETM1O95202 739 aaPredicted RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 C22orf31O95567 290 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 TFRCP02786 760 aaKnown RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 RPN1P04843 607 aaKnown RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 GJB1P08034 283 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 GAP43P17677 238 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 MDM2Q00987 491 aaPredicted RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 COASYQ13057 564 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 GIT2Q14161 759 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 NBPF20Q3BBV1 942 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 CCSAPQ6IQ19 270 aaPredicted RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 CNNM4Q6P4Q7 775 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 SASS6Q6UVJ0 657 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 UNC13DQ70J99 1090 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 SFR1Q86XK3 245 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 EXOC8Q8IYI6 725 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 LRRC71Q8N4P6 559 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 METTL13Q8N6R0 699 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 RETREG2Q8NC44 543 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 KIFAP3Q92845 792 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 TMEM143Q96AN5 459 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZBTB10Q96DT7 871 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 DHX33Q9H6R0 707 aaKnown RBP8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 SUGCTQ9HAC7 445 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 PARVGQ9HBI0 331 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 POLD4Q9HCU8 107 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 GPRC5CQ9NQ84 441 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 STARD7Q9NQZ5 370 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 SETD4Q9NVD3 440 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 KIAA1468Q9P260 1216 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 HDAC6Q9UBN7 1215 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 TUBE1Q9UJT0 475 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 OGDHLQ9ULD0 1010 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 ODF2LQ9ULJ1 636 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 PHF24Q9UPV7 400 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 COL4A3BPQ9Y5P4 624 aa8.77□□□□□ -1.01
HMGA1P4-201ENST00000428643 A0A0U1RQG5 324 aaPredicted RBP8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 PVALEFA0A1B0GWK0 134 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 RRN3P2A6NIE6 340 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 RSPH10B2B2RC85 870 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 MAGEB2O15479 319 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 MAFO75444 373 aaPredicted RBP8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 SGPL1O95470 568 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 RSPH10BP0C881 870 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 GNAT1P11488 350 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 KLRC1P26715 233 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 CLCN3P51790 818 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 SOX10P56693 466 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 MAPK7Q13164 816 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 DMP1Q13316 513 aaPredicted RBP8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 STX1AQ16623 288 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 KMT5BQ4FZB7 885 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 HERC4Q5GLZ8 1057 aaPredicted RBP8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 ODR4Q5SWX8 454 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 ISM2Q6H9L7 571 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 NFRKBQ6P4R8 1299 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 RBM43Q6ZSC3 357 aaKnown RBP8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 MYCT1Q8N699 235 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 TCP11Q8WWU5 503 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 DNAJC19Q96DA6 116 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 SCLT1Q96NL6 688 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 GSDMAQ96QA5 445 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 MAP7D2Q96T17 732 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 FAM49AQ9H0Q0 323 aaPredicted RBP8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 XPNPEP1Q9NQW7 623 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 TBC1D7Q9P0N9 293 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 MAN1B1Q9UKM7 699 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
HMGA1P4-201ENST00000428643 FRMD3A2A2Y4 597 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 LRRIQ4A6NIV6 560 aa8.75□□□□□ -1.01
HMGA1P4-201ENST00000428643 SFI1A8K8P3 1242 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms