RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SLC24A5Q71RS6 500 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 THNSL1Q8IYQ7 743 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 COLGALT1Q8NBJ5 622 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 GJA10Q969M2 543 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 PPP2R3CQ969Q6 453 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 POP1Q99575 1024 aaKnown RBP18.78■□□□□ 0.6
VARS-216ENST00000428445 MAFBQ9Y5Q3 323 aaPredicted RBP18.78■□□□□ 0.6
VARS-216ENST00000428445 COL1A2P08123 1366 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 ZNF318Q5VUA4 2279 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 hCG_1984214I3L0E3 225 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 EDIL3O43854 480 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 METAP2P50579 478 aaKnown RBP eCLIP18.77■□□□□ 0.62e-7■■■■□ 21.8
VARS-216ENST00000428445 CRYBB1P53674 252 aaPredicted RBP18.77■□□□□ 0.6
VARS-216ENST00000428445 DSC3Q14574 896 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 LRRC71Q8N4P6 559 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 ZNF713Q8N859 430 aaPredicted RBP18.77■□□□□ 0.6
VARS-216ENST00000428445 BBXQ8WY36 941 aaPredicted RBP18.77■□□□□ 0.6
VARS-216ENST00000428445 EDAQ92838 391 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 PHKBQ93100 1093 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 RPGRIP1Q96KN7 1286 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 TLR9Q9NR96 1032 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 C1orf112Q9NSG2 853 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 RNF19AQ9NV58 838 aa18.77■□□□□ 0.6
VARS-216ENST00000428445 LOC730098B7Z3J9 87 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 FGFR4P22455 802 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 MRE11P49959 708 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 NLRP11P59045 1033 aaKnown RBP18.76■□□□□ 0.59
VARS-216ENST00000428445 FAM189BP81408 668 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 FGD1P98174 961 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 IER5LQ5T953 404 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 PLPP4Q5VZY2 271 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 EFCAB12Q6NXP0 572 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 BRF1Q92994 677 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 PHOX2BQ99453 314 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 ZMYND12Q9H0C1 365 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 ATP6V0A4Q9HBG4 840 aa18.76■□□□□ 0.59
VARS-216ENST00000428445 DUSP6Q16828 381 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 ZNF746Q6NUN9 644 aaPredicted RBP18.75■□□□□ 0.59
VARS-216ENST00000428445 LLGL2Q6P1M3 1020 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 FAM43BQ6ZT52 329 aaPredicted RBP18.75■□□□□ 0.59
VARS-216ENST00000428445 GLT8D2Q9H1C3 349 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 AAASQ9NRG9 546 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 TMEM161AQ9NX61 479 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 CDH22Q9UJ99 828 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 AKT3Q9Y243 479 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 SAMM50Q9Y512 469 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 PCDHA10Q9Y5I2 948 aa18.75■□□□□ 0.59
VARS-216ENST00000428445 TMEM221A6NGB7 291 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 HIDE1A8MVS5 230 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 M0R296 226 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 FSCN2O14926 492 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 ZNF862O60290 1169 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 CSDE1O75534 798 aaKnown RBP18.74■□□□□ 0.59
VARS-216ENST00000428445 PSAPP07602 524 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 SP100P23497 879 aaPredicted RBP18.74■□□□□ 0.59
VARS-216ENST00000428445 UGCGQ16739 394 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 REXO1Q8N1G1 1221 aaKnown RBP18.74■□□□□ 0.59
VARS-216ENST00000428445 RNF169Q8NCN4 708 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 LENG9Q96B70 501 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 JAKMIP1Q96N16 626 aaKnown RBP18.74■□□□□ 0.59
VARS-216ENST00000428445 ADAMTS10Q9H324 1103 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 C6orf50Q9HD87 102 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 TBC1D22BQ9NU19 505 aa18.74■□□□□ 0.59
VARS-216ENST00000428445 PRPF3O43395 683 aaKnown RBP18.73■□□□□ 0.59
VARS-216ENST00000428445 CHMP2AO43633 222 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 ZXDAP98168 799 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 UBE3AQ05086 875 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 KRT32Q14532 448 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 TRIM67Q6ZTA4 783 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 LINC01465Q8N7H1 131 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 PBXIP1Q96AQ6 731 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 MFSD14AQ96MC6 490 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 PHF7Q9BWX1 381 aaPredicted RBP18.73■□□□□ 0.59
VARS-216ENST00000428445 VPS54Q9P1Q0 977 aa18.73■□□□□ 0.59
VARS-216ENST00000428445 ESYT2A0FGR8 921 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 TMEM150BA6NC51 233 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 MSH4O15457 936 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 CDC45O75419 566 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 TECP42680 631 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 CCT2P78371 535 aaKnown RBP18.72■□□□□ 0.59
VARS-216ENST00000428445 DRP2Q13474 957 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 ODR4Q5SWX8 454 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 KCNT2Q6UVM3 1135 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 SMAP1Q8IYB5 467 aaPredicted RBP18.72■□□□□ 0.59
VARS-216ENST00000428445 PRSS33Q8NF86 280 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 SUSD6Q92537 303 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 MRPS27Q92552 414 aaKnown RBP18.72■□□□□ 0.59
VARS-216ENST00000428445 TCF25Q9BQ70 676 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 SH2D3AQ9BRG2 576 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 S1PR5Q9H228 398 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 ELAC1Q9H777 363 aaKnown RBP18.72■□□□□ 0.59
VARS-216ENST00000428445 TCEAL9Q9UHQ7 104 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 PIEZO1Q92508 2521 aa18.72■□□□□ 0.59
VARS-216ENST00000428445 NT5C1B-RDH14C9J2C7 533 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 LAG3P18627 525 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 CIITAP33076 1130 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 SETQ01105 290 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms