RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TMEM266Q2M3C6 531 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 PTCRAQ6ISU1 281 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 EFCAB12Q6NXP0 572 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 MIER3Q7Z3K6 550 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 RTN4RL1Q86UN2 441 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 CRIPAKQ8N1N5 446 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 NEK9Q8TD19 979 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 UIMC1Q96RL1 719 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 OSMRQ99650 979 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 ELAC1Q9H777 363 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 PCDHB12Q9Y5F1 795 aa17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 MRPL42Q9Y6G3 142 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-202ENST00000428361 BDP1A6H8Y1 2624 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 EVPLQ92817 2033 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 REV3LO60673 3130 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 PSMD10O75832 226 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 LINC00271P0C7V0 271 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 DNM2P50570 870 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 UBE3AQ05086 875 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 COL19A1Q14993 1142 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 PAN2Q504Q3 1202 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 XKR3Q5GH77 459 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 SPOUT1Q5T280 376 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 RSPH1Q8WYR4 309 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 JPH2Q9BR39 696 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 ATP6V0A4Q9HBG4 840 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 TMEM161AQ9NX61 479 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 DDX25Q9UHL0 483 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
CTDSP1-202ENST00000428361 GRM6O15303 877 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 GPR32O75388 356 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 VTNP04004 478 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 EIF4BP23588 611 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 CLCN3P51790 818 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 NLRP11P59045 1033 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 FAM228AQ86W67 206 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 EXOC8Q8IYI6 725 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 TMEM40Q8WWA1 233 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 UNC45AQ9H3U1 944 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 BRMS1Q9HCU9 246 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 PRKAG3Q9UGI9 489 aa17.41■□□□□ 0.38
CTDSP1-202ENST00000428361 GRXCR2A6NFK2 248 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 C9IYK1 514 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 M0R2N6 131 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 ZNF862O60290 1169 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 LINC01465Q8N7H1 131 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 MBOAT7Q96N66 472 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 INO80BQ9C086 356 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 SEPT9Q9UHD8 586 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 PPME1Q9Y570 386 aa17.4■□□□□ 0.38
CTDSP1-202ENST00000428361 CARNS1A5YM72 827 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 TBKBP1A7MCY6 615 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 MARCH6O60337 910 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 PFKFB2O60825 505 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 TDP2O95551 362 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 LAG3P18627 525 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 IBSPP21815 317 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 SCRN1Q12765 414 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 LETM2Q2VYF4 491 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 PDE12Q6L8Q7 609 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 NEK8Q86SG6 692 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 LRRC71Q8N4P6 559 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 KLHL23Q8NBE8 558 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 ETNPPLQ8TBG4 499 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 POP1Q99575 1024 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 NIFKQ9BYG3 293 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 CDHR5Q9HBB8 845 aa17.39■□□□□ 0.37
CTDSP1-202ENST00000428361 H3BQ06 376 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 TBX3O15119 743 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 MGEA5O60502 916 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 ITGB1P05556 798 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 COL9A1P20849 921 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 SSTR3P32745 418 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 GPC3P51654 580 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 PSMC5P62195 406 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 FAM189BP81408 668 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 INF2Q27J81 1249 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 CTC1Q2NKJ3 1217 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 GJD3Q8N144 294 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 SPPL3Q8TCT6 385 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 POF1BQ8WVV4 589 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 NLRP7Q8WX94 980 aa17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 LARP6Q9BRS8 491 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-202ENST00000428361 GCOM2Q9BZD3 368 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms