RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 MIER1Q8N108 512 aa13.73□□□□□ -0.21
DDX39B-208ENST00000428098 GPR161Q8N6U8 529 aaKnown RBP13.73□□□□□ -0.21
DDX39B-208ENST00000428098 ENAHQ8N8S7 591 aaPredicted RBP13.73□□□□□ -0.21
DDX39B-208ENST00000428098 TMEM117Q9H0C3 514 aa13.73□□□□□ -0.21
DDX39B-208ENST00000428098 SMARCAD1Q9H4L7 1026 aa13.73□□□□□ -0.21
DDX39B-208ENST00000428098 DZANK1Q9NVP4 752 aa13.73□□□□□ -0.21
DDX39B-208ENST00000428098 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
DDX39B-208ENST00000428098 DENND4AQ7Z401 1863 aa13.73□□□□□ -0.21
DDX39B-208ENST00000428098 CNOT1A5YKK6 2376 aaKnown RBP13.72□□□□□ -0.21
DDX39B-208ENST00000428098 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 RPS6KA5O75582 802 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
DDX39B-208ENST00000428098 LMNB2Q03252 620 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 DSC3Q14574 896 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 ACAP1Q15027 740 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 NME8Q8N427 588 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 GPR152Q8TDT2 470 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 ESR2Q92731 530 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 COL26A1Q96A83 441 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 FOXQ1Q9C009 403 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 DCTPP1Q9H773 170 aa13.72□□□□□ -0.21
DDX39B-208ENST00000428098 ELAC1Q9H777 363 aaKnown RBP13.72□□□□□ -0.21
DDX39B-208ENST00000428098 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-208ENST00000428098 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 BAZ2BQ9UIF8 2168 aaKnown RBP13.71□□□□□ -0.21
DDX39B-208ENST00000428098 SMIM35A0A1B0GVV1 85 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 RFX1P22670 979 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 CA8P35219 290 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 PPM1AP35813 382 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 MTHFD1LQ6UB35 978 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-208ENST00000428098 KIAA0319LQ8IZA0 1049 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 PIGSQ96S52 555 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 ZSCAN10Q96SZ4 725 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-208ENST00000428098 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.21
DDX39B-208ENST00000428098 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.22
DDX39B-208ENST00000428098 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
DDX39B-208ENST00000428098 PCP11498 1178 aaKnown RBP13.7□□□□□ -0.22
DDX39B-208ENST00000428098 ZNF528Q3MIS6 628 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 CLLU1OSQ5K130 101 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 PCNX4Q63HM2 1172 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 CABP7Q86V35 215 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
DDX39B-208ENST00000428098 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 VPS52Q8N1B4 723 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
DDX39B-208ENST00000428098 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 PKD2L1Q9P0L9 805 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 ZSWIM5Q9P217 1185 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 MAD2L2Q9UI95 211 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 IRAK3Q9Y616 596 aa13.7□□□□□ -0.22
DDX39B-208ENST00000428098 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-208ENST00000428098 SRFP11831 508 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 ITGB5P18084 799 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 KLRC1P26715 233 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDX39B-208ENST00000428098 WTAPQ15007 396 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-208ENST00000428098 PJA1Q8NG27 643 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 MYADMQ96S97 322 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 USP18Q9UMW8 372 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-208ENST00000428098 SPEGQ15772 3267 aa13.69□□□□□ -0.22
DDX39B-208ENST00000428098 B4E1Z4 1266 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 GPR182O15218 404 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 SPTLC1O15269 473 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 CYTH3O43739 400 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 CTSAP10619 480 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 BCAR1P56945 870 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 CSTF1Q05048 431 aaKnown RBP13.68□□□□□ -0.22
DDX39B-208ENST00000428098 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 DCLRE1AQ6PJP8 1040 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 FAM43BQ6ZT52 329 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-208ENST00000428098 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 IQCA1Q86XH1 822 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 LRRC43Q8N309 656 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 ZBTB44Q8NCP5 570 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 BCL7CQ8WUZ0 217 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-208ENST00000428098 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 RNF41Q9H4P4 317 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-208ENST00000428098 RIOX1Q9H6W3 641 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 SFXN1Q9H9B4 322 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
DDX39B-208ENST00000428098 C2orf16Q68DN1 1984 aa13.68□□□□□ -0.22
DDX39B-208ENST00000428098 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
DDX39B-208ENST00000428098 COL4A3Q01955 1670 aa13.67□□□□□ -0.22
DDX39B-208ENST00000428098 SLC30A4O14863 429 aa13.67□□□□□ -0.22
DDX39B-208ENST00000428098 LILRB5O75023 590 aa13.67□□□□□ -0.22
DDX39B-208ENST00000428098 MS4A1P11836 297 aa13.67□□□□□ -0.22
DDX39B-208ENST00000428098 STARD6P59095 220 aa13.67□□□□□ -0.22
DDX39B-208ENST00000428098 PTPN14Q15678 1187 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms