RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NKIRAS1Q9NYS0 192 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PLK2Q9NYY3 685 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 CTNND2Q9UQB3 1225 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PCDHA13Q9Y5I0 950 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PHRF1Q9P1Y6 1649 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 LMTK3Q96Q04 1460 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 A0A087WWV3 80 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 KLF18A0A0U1RQI7 1052 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TTC26A0AVF1 554 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PHF20L1A8MW92 1017 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 E7EWF7 191 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 GOLGA8TH3BQL2 631 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SH2B2O14492 632 aaPredicted RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TTI1O43156 1089 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CCDC22O60826 627 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SRGAP2O75044 1071 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 STK10O94804 968 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 ESRRBO95718 433 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 OAS1P00973 400 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 ITGA2BP08514 1039 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PABPC4LP0CB38 370 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 GOLGA8HP0CJ92 632 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 MYBP10242 640 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CHN1P15882 459 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PHBP35232 272 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 RFC5P40937 340 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAGEA1P43355 309 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRPC1P48995 793 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CARSP49589 748 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 METAP2P50579 478 aaKnown RBP eCLIP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SCNN1BP51168 640 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 ADARP55265 1226 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 GPSM2P81274 684 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 HPCAP84074 193 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 GUCY1B3Q02153 619 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 DSG1Q02413 1049 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SLC34A1Q06495 639 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PDE4BQ07343 736 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 AP1B1Q10567 949 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 USP4Q13107 963 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 DHX34Q14147 1143 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 QPCTQ16769 361 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CNPY1Q3B7I2 92 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZCWPW2Q504Y3 356 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SYCP2LQ5T4T6 812 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 WDR78Q5VTH9 848 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TBC1D9BQ66K14 1250 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SPTY2D1Q68D10 685 aaPredicted RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 MFSD5Q6N075 450 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 B3GNT6Q6ZMB0 384 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 HS2ST1Q7LGA3 356 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 VPS36Q86VN1 386 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRMT44Q8IYL2 757 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 USP38Q8NB14 1042 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SPATA5Q8NB90 893 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM136AQ96C01 138 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 DGCR14Q96DF8 476 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TCEANC2Q96MN5 208 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 FMO2Q99518 471 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAP3K14Q99558 947 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 ARPC5LQ9BPX5 153 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 ELAC2Q9BQ52 826 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SYT15Q9BQS2 421 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CORO1BQ9BR76 489 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CCDC77Q9BR77 488 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRIM55Q9BYV6 548 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PUS3Q9BZE2 481 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PABPC3Q9H361 631 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CUEDC2Q9H467 287 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 SYNCQ9H7C4 482 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PPCSQ9HAB8 311 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 GPCPD1Q9NPB8 672 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PRDM9Q9NQV7 894 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 RBM12Q9NTZ6 932 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 DDX43Q9NXZ2 648 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CABP1Q9NZU7 370 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 LNPEPQ9UIQ6 1025 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 PLAGL2Q9UPG8 496 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 R3HDM2Q9Y2K5 976 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 USP20Q9Y2K6 914 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 FCF1Q9Y324 198 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 REXO2Q9Y3B8 237 aaKnown RBP6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 RABGAP1Q9Y3P9 1069 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 DISP2A7MBM2 1401 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 MON2Q7Z3U7 1717 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 CPDO75976 1380 aa6.05□□□□□ -1.44
VTI1BP4-201ENST00000427516 UMODL1Q5DID0 1318 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 PITPNM2Q9BZ72 1349 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMEM247A6NEH6 219 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SPDYE5A6NIY4 337 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRIM75PA6NK02 468 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 F8W031 263 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 F8W8V4 182 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 H0YGN5 161 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 PDE2AO00408 941 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ATP9AO75110 1047 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 CLASP2O75122 1294 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 CIB2O75838 187 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ATP5BP06576 529 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 KRT16P08779 473 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms