RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 STRA6Q9BX79 667 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 KCTD10Q9H3F6 313 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 METTL14Q9HCE5 456 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 POTEFA5A3E0 1075 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 PHACTR2O75167 634 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 POTEIP0CG38 1075 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 CASP1P29466 404 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 MAGEA9P43362 315 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 ITGB3BPQ13352 177 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 MAN2A1Q16706 1144 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 TTC31Q49AM3 519 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 HSP90B2PQ58FF3 399 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 ANKRD40Q6AI12 368 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 NSMFQ6X4W1 530 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 GADL1Q6ZQY3 521 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 FRMD5Q7Z6J6 570 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 AFAP1L1Q8TED9 768 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 ANKZF1Q9H8Y5 726 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 PARVGQ9HBI0 331 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 ABCB6Q9NP58 842 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 TYW1Q9NV66 732 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 PCDHB13Q9Y5F0 798 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 ASB14A6NK59 587 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 KRT18P05783 430 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 CCDC175P0C221 793 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 INHBEP58166 350 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 CDK17Q00537 523 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 MTF1Q14872 753 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 KNOP1Q1ED39 458 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 HERC4Q5GLZ8 1057 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 MIS18BP1Q6P0N0 1132 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 CEP112Q8N8E3 955 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 PNKPQ96T60 521 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 LXNQ9BS40 222 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 NTPCRQ9BSD7 190 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 NUCKS1Q9H1E3 243 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 MRPL44Q9H9J2 332 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 BTBD7Q9P203 1132 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 BCCIPQ9P287 314 aaKnown RBP eCLIP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 L1RE1Q9UN81 338 aa9.38□□□□□ -0.91
SH3D19-204ENST00000427414 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
SH3D19-204ENST00000427414 ARHGEF35A5YM69 484 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 EIF3CLB5ME19 914 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 SLC26A2P50443 739 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 KLHL10Q6JEL2 608 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 LRRC55Q6ZSA7 311 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 FMNL3Q8IVF7 1028 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 ANKRD35Q8N283 1001 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 IL31RAQ8NI17 732 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 SPIRE2Q8WWL2 714 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 MS4A4AQ96JQ5 239 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 PLIN2Q99541 437 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 EIF3CQ99613 913 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 REEP2Q9BRK0 252 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 BHMT2Q9H2M3 363 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 TMEM206Q9H813 350 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 TBC1D7Q9P0N9 293 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 LARSQ9P2J5 1176 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 JRKLQ9Y4A0 524 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 IGSF9BQ9UPX0 1349 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 AKR1B15C9JRZ8 316 aaPredicted RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 ANKRD65E5RJM6 399 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 N4BP3O15049 544 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 KIF5CO60282 957 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 RHOXF2BP0C7M4 288 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 ABHD15Q6UXT9 468 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 PPFIBP1Q86W92 1011 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 TPH2Q8IWU9 490 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 TRMT44Q8IYL2 757 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 MCPH1Q8NEM0 835 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 KIFAP3Q92845 792 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 HHIPL1Q96JK4 782 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 RHOXF2Q9BQY4 288 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 NIFKQ9BYG3 293 aaKnown RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 YY1AP1Q9H869 796 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 JPH1Q9HDC5 661 aaPredicted RBP9.37□□□□□ -0.91
SH3D19-204ENST00000427414 RBPJLQ9UBG7 517 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 SLC9A2Q9UBY0 812 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 CDC23Q9UJX2 597 aa9.37□□□□□ -0.91
SH3D19-204ENST00000427414 RBM47A0AV96 593 aaKnown RBP9.36□□□□□ -0.91
SH3D19-204ENST00000427414 GTPBP10A4D1E9 387 aaKnown RBP9.36□□□□□ -0.91
SH3D19-204ENST00000427414 DCAF8L1A6NGE4 600 aa9.36□□□□□ -0.91
SH3D19-204ENST00000427414 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
SH3D19-204ENST00000427414 SOCS7O14512 581 aa9.36□□□□□ -0.91
SH3D19-204ENST00000427414 KIAA0391O15091 583 aaKnown RBP9.36□□□□□ -0.91
SH3D19-204ENST00000427414 PMM2O15305 246 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms