RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FRMD3A2A2Y4 597 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 PPP1R11O60927 126 aaPredicted RBP14.59□□□□□ -0.07
USP42-203ENST00000426246 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
USP42-203ENST00000426246 EPHB4P54760 987 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 ICA1Q05084 483 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 DAGLBQ8NCG7 672 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 HOOK2Q96ED9 719 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 TAOK3Q9H2K8 898 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 TTI1O43156 1089 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 CALCAP01258 141 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 FGGP02679 453 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 TNNC1P63316 161 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 SNX1Q13596 522 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 GUF1Q8N442 669 aaKnown RBP14.59□□□□□ -0.07
USP42-203ENST00000426246 DYDC1Q8WWB3 177 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 CCDC17Q96LX7 622 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 REEP2Q9BRK0 252 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 CTTNBP2NLQ9P2B4 639 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 ZNF70Q9UC06 446 aaPredicted RBP14.59□□□□□ -0.07
USP42-203ENST00000426246 TISP43B9A030 160 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 TLR2O60603 784 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 MTM1Q13496 603 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 NIM1KQ8IY84 436 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 CASKIN2Q8WXE0 1202 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 GLG1Q92896 1179 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 LTBP3Q9NS15 1303 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 EIF4E1BA6NMX2 242 aaKnown RBP14.58□□□□□ -0.08
USP42-203ENST00000426246 GH2P01242 217 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 MESDQ14696 234 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 SIK3Q9Y2K2 1263 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 PNMA6FA0A0J9YX94 578 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 LAD1O00515 517 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 EPB41P11171 864 aaKnown RBP14.58□□□□□ -0.08
USP42-203ENST00000426246 NR1D1P20393 614 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 ZNF543Q08ER8 600 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 E2F5Q15329 346 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 TTMPQ5BVD1 217 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 WDR93Q6P2C0 686 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 SCFD1Q8WVM8 642 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 ERGIC2Q96RQ1 377 aa14.58□□□□□ -0.08
USP42-203ENST00000426246 TMEM150BA6NC51 233 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 SERPING1P05155 500 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 ACTN3Q08043 901 aaPredicted RBP14.57□□□□□ -0.08
USP42-203ENST00000426246 BANK1Q8NDB2 785 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 HAS1Q92839 578 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 CCDC114Q96M63 670 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
USP42-203ENST00000426246 H2AFZP0C0S5 128 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 MYZAPP0CAP1 466 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
USP42-203ENST00000426246 ARHGAP4P98171 946 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 SETQ01105 290 aaPredicted RBP14.57□□□□□ -0.08
USP42-203ENST00000426246 FAM182AQ5T1J6 154 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 H2AFVQ71UI9 128 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 CATSPER3Q86XQ3 398 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 NLGN2Q8NFZ4 835 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 USP20Q9Y2K6 914 aa14.57□□□□□ -0.08
USP42-203ENST00000426246 TUBBP07437 444 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 TNFAIP3P21580 790 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 EPC2Q52LR7 807 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 ASPRV1Q53RT3 343 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 HP1BP3Q5SSJ5 553 aaPredicted RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 ODR4Q5SWX8 454 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 GALNT17Q6IS24 598 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 ERMNQ8TAM6 284 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 DICER1Q9UPY3 1922 aaKnown RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 ATAD5Q96QE3 1844 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 ZBTB5O15062 677 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 SART1O43290 800 aaKnown RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 PPP1R12BO60237 982 aaPredicted RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 EGFRP00533 1210 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 ZNF571Q7Z3V5 609 aaPredicted RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 PPM1EQ8WY54 764 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 RPGRIP1Q96KN7 1286 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 NYAP2Q9P242 653 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 STK17AQ9UEE5 414 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 VIMP08670 466 aaKnown RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 LRRC63Q05C16 580 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 MEA1Q16626 185 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 PPP1R18Q6NYC8 613 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 BTBD6Q96KE9 485 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 LBHD1Q9BQE6 289 aaPredicted RBP14.56□□□□□ -0.08
USP42-203ENST00000426246 CUEDC2Q9H467 287 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 FBXL5Q9UKA1 691 aa14.56□□□□□ -0.08
USP42-203ENST00000426246 WNT10BO00744 389 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 AKAP3O75969 853 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 UCHL3P15374 230 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 FLT3P36888 993 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 CDR1P51861 262 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 DLGAP5Q15398 846 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 FKBP1CQ5VVH2 108 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 FAM151AQ8WW52 585 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 SPIRE2Q8WWL2 714 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 CSRNP1Q96S65 589 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 TTYH3Q9C0H2 523 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 RABGAP1Q9Y3P9 1069 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 CTDP1Q9Y5B0 961 aaPredicted RBP14.55□□□□□ -0.08
USP42-203ENST00000426246 ANO9A1A5B4 782 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms