RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 XKR3Q5GH77 459 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 CCDC60Q8IWA6 550 aaPredicted RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 TMEM174Q8WUU8 243 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 PORCNQ9H237 461 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 C17orf75Q9HAS0 396 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 POLD4Q9HCU8 107 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 CAPN11Q9UMQ6 739 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 LRRC37A2A6NM11 1700 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 ASB14A6NK59 587 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 TGFB1I1O43294 461 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 FARP2O94887 1054 aaPredicted RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 NR3C1P04150 777 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 PGK2P07205 417 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 SYCP1Q15431 976 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 UTP14CQ5TAP6 766 aaKnown RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 METTL7BQ6UX53 244 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 HS2ST1Q7LGA3 356 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 KIFAP3Q92845 792 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 PARK7Q99497 189 aaKnown RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 TTYH3Q9C0H2 523 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 METTL14Q9HCE5 456 aaKnown RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 CGNQ9P2M7 1197 aaKnown RBP15.87■□□□□ 0.13
CDK3-201ENST00000425876 WDR81Q562E7 1941 aa15.87■□□□□ 0.13
CDK3-201ENST00000425876 ZMYM2Q9UBW7 1377 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 A0A1W2PQJ5 194 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 DGAT1O75907 488 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 NPEPPSP55786 919 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 RTP1P59025 263 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 SNRPFP62306 86 aaKnown RBP15.86■□□□□ 0.13
CDK3-201ENST00000425876 PRKCEQ02156 737 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 PLA2G4FQ68DD2 849 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 MCPH1Q8NEM0 835 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 CPLX3Q8WVH0 158 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 CEP170P1Q96L14 293 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 MKNK1Q9BUB5 465 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 GBP3Q9H0R5 595 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 TMEM206Q9H813 350 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 EFCC1Q9HA90 598 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 PDLIM7Q9NR12 457 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 DDX41Q9UJV9 622 aaKnown RBP15.86■□□□□ 0.13
CDK3-201ENST00000425876 SIK3Q9Y2K2 1263 aa15.86■□□□□ 0.13
CDK3-201ENST00000425876 LUC7L2Q9Y383 392 aaKnown RBP15.86■□□□□ 0.13
CDK3-201ENST00000425876 MYH11P35749 1972 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 TTC26A0AVF1 554 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 NKRFO15226 690 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■■■■□ 26.2
CDK3-201ENST00000425876 KRT9P35527 623 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 GTF2BQ00403 316 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 KCNA1Q09470 495 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 ZC2HC1CQ53FD0 456 aaPredicted RBP15.85■□□□□ 0.13
CDK3-201ENST00000425876 WDR78Q5VTH9 848 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 ZNF467Q7Z7K2 595 aaPredicted RBP15.85■□□□□ 0.13
CDK3-201ENST00000425876 TMTC1Q8IUR5 882 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 SLC9A9Q8IVB4 645 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 ANKRD13CQ8N6S4 541 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 OR8K1Q8NGG5 319 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 AFAP1L1Q8TED9 768 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 HVCN1Q96D96 273 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 DNAJC7Q99615 494 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 EDEM3Q9BZQ6 932 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
CDK3-201ENST00000425876 CYP26B1Q9NR63 512 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 ABHD10Q9NUJ1 306 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 DMAC2Q9NW81 257 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 ARMCX3Q9UH62 379 aaPredicted RBP15.85■□□□□ 0.13
CDK3-201ENST00000425876 KCNG1Q9UIX4 513 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 TELO2Q9Y4R8 837 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDK3-201ENST00000425876 PCNTO95613 3336 aa15.85■□□□□ 0.13
CDK3-201ENST00000425876 GSTTP1A0A1W2PQM5 241 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 TMEM150BA6NC51 233 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 RASSF10A6NK89 507 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 K7ENM7 598 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 HUNKP57058 714 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 SP4Q02446 784 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 FAM110CQ1W6H9 321 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 ZNF792Q3KQV3 632 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 CCDC62Q6P9F0 684 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 C12orf56Q8IXR9 622 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 ACCSQ96QU6 501 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 PTPN18Q99952 460 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 NIFKQ9BYG3 293 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 ABT1Q9ULW3 272 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 PPME1Q9Y570 386 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 ZNFX1Q9P2E3 1918 aaKnown RBP15.84■□□□□ 0.13
CDK3-201ENST00000425876 DOCK5Q9H7D0 1870 aa15.84■□□□□ 0.13
CDK3-201ENST00000425876 RNF225M0QZC1 329 aaPredicted RBP15.83■□□□□ 0.13
CDK3-201ENST00000425876 KIF2AO00139 706 aaPredicted RBP15.83■□□□□ 0.13
CDK3-201ENST00000425876 ZSCAN12O43309 604 aa15.83■□□□□ 0.13
CDK3-201ENST00000425876 GGPS1O95749 300 aa15.83■□□□□ 0.13
CDK3-201ENST00000425876 OATP04181 439 aa15.83■□□□□ 0.13
CDK3-201ENST00000425876 TUBB4AP04350 444 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms