RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 JAG1P78504 1218 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 TRAF1Q13077 416 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 CTTNQ14247 550 aaKnown RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 DLGAP5Q15398 846 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 NAB2Q15742 525 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 KNOP1Q1ED39 458 aaKnown RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 C1QTNF12Q5T7M4 302 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 EMBQ6PCB8 327 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 TRIM59Q8IWR1 403 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 SUPT20HQ8NEM7 779 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 PIGOQ8TEQ8 1089 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 GOPCQ9HD26 462 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 HDAC9Q9UKV0 1011 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
COL12A1-205ENST00000425443 PAX7P23759 505 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 LIG3P49916 1009 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 KCNA1Q09470 495 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 MEI1Q5TIA1 1274 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 DPY19L2P1Q6NXN4 242 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 GJB7Q6PEY0 223 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
COL12A1-205ENST00000425443 EIF2AK1Q9BQI3 630 aaKnown RBP14.16□□□□□ -0.14
COL12A1-205ENST00000425443 KCTD10Q9H3F6 313 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 FAM169AQ9Y6X4 670 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 TMCO5BA8MYB1 307 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 GOLGA8KD6RF30 607 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 SLC26A4O43511 780 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
COL12A1-205ENST00000425443 FAM13AO94988 1023 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 MYBP10242 640 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 XRCC5P13010 732 aaKnown RBP14.16□□□□□ -0.14
COL12A1-205ENST00000425443 NNTQ13423 1086 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 ASIC2Q16515 512 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 CFAP221Q4G0U5 840 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 FOXR2Q6PJQ5 311 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 KSR1Q8IVT5 923 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 IQCKQ8N0W5 287 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 ACER1Q8TDN7 264 aa14.16□□□□□ -0.14
COL12A1-205ENST00000425443 THOC1Q96FV9 657 aaKnown RBP14.16□□□□□ -0.14
COL12A1-205ENST00000425443 RAD51CO43502 376 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 SPATA31C1P0DKV0 1188 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 EPB41P11171 864 aaKnown RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 RPL13P26373 211 aaKnown RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 TNFRSF8P28908 595 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 GUCY1A3Q02108 690 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 EDRF1Q3B7T1 1238 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 RNPC3Q96LT9 517 aaKnown RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 MBOAT7Q96N66 472 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 GANQ9H2C0 597 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 HERC5Q9UII4 1024 aaKnown RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 AJAP1Q9UKB5 411 aaPredicted RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 KCNK3O14649 394 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 SPIRE1Q08AE8 756 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 HLTFQ14527 1009 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 RRP1BQ14684 758 aaKnown RBP14.15□□□□□ -0.14
COL12A1-205ENST00000425443 ZEB2O60315 1214 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 HSF2BPO75031 334 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 MTA1Q13330 715 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 PLS1Q14651 629 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 SLC18A3Q16572 532 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 MIGA2Q7L4E1 593 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 LARGE2Q8N3Y3 721 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 PCDHGC5Q9Y5F6 944 aa14.15□□□□□ -0.14
COL12A1-205ENST00000425443 GAS7O60861 476 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 AFPP02771 609 aaKnown RBP14.14□□□□□ -0.15
COL12A1-205ENST00000425443 ECHS1P30084 290 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 TADA2BQ86TJ2 420 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL12A1-205ENST00000425443 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
COL12A1-205ENST00000425443 CHURC1Q8WUH1 139 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 LENG9Q96B70 501 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 AP1M1Q9BXS5 423 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 EHMT1Q9H9B1 1298 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 EML1O00423 815 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 ZBTB39O15060 712 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 HOXD13P35453 343 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 CASP4P49662 377 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 SKOR1P84550 965 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 PTK2Q05397 1052 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 ZNF571Q7Z3V5 609 aaPredicted RBP14.14□□□□□ -0.15
COL12A1-205ENST00000425443 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 LRRC4CQ9HCJ2 640 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 SCN9AQ15858 1988 aa14.14□□□□□ -0.15
COL12A1-205ENST00000425443 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 EFCAB13Q8IY85 973 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 OR2W6PQ8NHA6 318 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 RBM46Q8TBY0 533 aaKnown RBP14.13□□□□□ -0.15
COL12A1-205ENST00000425443 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
COL12A1-205ENST00000425443 NEUROG2Q9H2A3 272 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms