RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 KIZQ2M2Z5 673 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 CPLX2Q6PUV4 134 aaKnown RBP14.69□□□□□ -0.06
VRK3-203ENST00000424804 ADHFE1Q8IWW8 467 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 POF1BQ8WVV4 589 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
VRK3-203ENST00000424804 CEP89Q96ST8 783 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 ADAM2Q99965 735 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 ADAMTS10Q9H324 1103 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 IGFLR1Q9H665 355 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 CWH43Q9H720 699 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 C6orf50Q9HD87 102 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 PCDHA10Q9Y5I2 948 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 ZNF318Q5VUA4 2279 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 MSH4O15457 936 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 DTNBO60941 627 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 STBD1O95210 358 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 EYA4O95677 639 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 VTNP04004 478 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
VRK3-203ENST00000424804 NEK4P51957 841 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 AK2P54819 239 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 NPY5RQ15761 445 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 CLUL1Q15846 466 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 C8orf34Q49A92 452 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 PRR16Q569H4 304 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 MCTP2Q6DN12 878 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 B3GNT9Q6UX72 402 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 FAM43BQ6ZT52 329 aaPredicted RBP14.68□□□□□ -0.06
VRK3-203ENST00000424804 EP400NLQ6ZTU2 488 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 SLC24A5Q71RS6 500 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 TRIM22Q8IYM9 498 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 REXO1Q8N1G1 1221 aaKnown RBP14.68□□□□□ -0.06
VRK3-203ENST00000424804 FAM122AQ96E09 287 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 ZNF274Q96GC6 653 aaPredicted RBP14.68□□□□□ -0.06
VRK3-203ENST00000424804 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 OSMRQ99650 979 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 RNF26Q9BY78 433 aaPredicted RBP14.68□□□□□ -0.06
VRK3-203ENST00000424804 SLKQ9H2G2 1235 aaPredicted RBP14.68□□□□□ -0.06
VRK3-203ENST00000424804 GABBR1Q9UBS5 961 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 GINS2Q9Y248 185 aa14.68□□□□□ -0.06
VRK3-203ENST00000424804 PRR33A8MZF0 331 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 M0R2N6 131 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 CSPG5O95196 566 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 SSTR3P32745 418 aaPredicted RBP14.67□□□□□ -0.06
VRK3-203ENST00000424804 ERVFC1P60507 584 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 SETQ01105 290 aaPredicted RBP14.67□□□□□ -0.06
VRK3-203ENST00000424804 ANKRD1Q15327 319 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 UGCGQ16739 394 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 LRRC55Q6ZSA7 311 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 SMAP1Q8IYB5 467 aaPredicted RBP14.67□□□□□ -0.06
VRK3-203ENST00000424804 EFHBQ8N7U6 833 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 VN1R2Q8NFZ6 395 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 CCDC12Q8WUD4 166 aaPredicted RBP14.67□□□□□ -0.06
VRK3-203ENST00000424804 SLC5A5Q92911 643 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 GJA10Q969M2 543 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 TYW1Q9NV66 732 aaKnown RBP14.67□□□□□ -0.06
VRK3-203ENST00000424804 VPS54Q9P1Q0 977 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 PCDHB7Q9Y5E2 793 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 WDFY4Q6ZS81 3184 aa14.67□□□□□ -0.06
VRK3-203ENST00000424804 FSCN2O14926 492 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 GPR182O15218 404 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 PSAPP07602 524 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 FGFR1P11362 822 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 GNA11P29992 359 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 CLCN3P51790 818 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 RBM10P98175 930 aaKnown RBP14.66□□□□□ -0.06
VRK3-203ENST00000424804 SMAD4Q13485 552 aaKnown RBP14.66□□□□□ -0.06
VRK3-203ENST00000424804 KCNC3Q14003 757 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 TARBP2Q15633 366 aaKnown RBP14.66□□□□□ -0.06
VRK3-203ENST00000424804 C1orf112Q9NSG2 853 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 CD207Q9UJ71 328 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 TPCN1Q9ULQ1 816 aa14.66□□□□□ -0.06
VRK3-203ENST00000424804 TBKBP1A7MCY6 615 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 DCXO43602 365 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 PSMD10O75832 226 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 ALADP13716 330 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 NRIP1P48552 1158 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 USP11P51784 963 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 NLRP5P59047 1200 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 SCRN1Q12765 414 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 COASYQ13057 564 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 EFCAB12Q6NXP0 572 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 TRMT1LQ7Z2T5 733 aaKnown RBP14.65□□□□□ -0.06
VRK3-203ENST00000424804 LRRC71Q8N4P6 559 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 NECAB1Q8N987 351 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 COLGALT1Q8NBJ5 622 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 SMRP1Q8NCR6 262 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 MBOAT7Q96N66 472 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 UNC45AQ9H3U1 944 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 ELAC1Q9H777 363 aaKnown RBP14.65□□□□□ -0.06
VRK3-203ENST00000424804 TMEM161AQ9NX61 479 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 LRFN2Q9ULH4 789 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 PIEZO1Q92508 2521 aa14.65□□□□□ -0.06
VRK3-203ENST00000424804 CYP3A7-CYP3A51PA0A087WV96 503 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 MAGEB2O15479 319 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 FGF18O76093 207 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 OATP04181 439 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 CYP3A7P24462 503 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms