RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 MAP4P27816 1152 aaKnown RBP12.93□□□□□ -0.34
LAMA4-207ENST00000424408 BLVRAP53004 296 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 LRRC63Q05C16 580 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 FRA10AC1Q70Z53 315 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 BZW1Q7L1Q6 419 aaKnown RBP12.93□□□□□ -0.34
LAMA4-207ENST00000424408 SNX19Q92543 992 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 SPATA17Q96L03 361 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
LAMA4-207ENST00000424408 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 GIMAP4Q9NUV9 329 aa12.93□□□□□ -0.34
LAMA4-207ENST00000424408 INSRP06213 1382 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 VCAM1P19320 739 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 UBE3AQ05086 875 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 C7orf31Q8N865 590 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 SFMBT1Q9UHJ3 866 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 SEMA3EO15041 775 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 GCFC2P16383 781 aaKnown RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 PAMP19021 973 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ADORA1P30542 326 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 TMED10P49755 219 aaKnown RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ZNF211Q13398 564 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 SPATA21Q7Z572 469 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ADNPQ9H2P0 1102 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 GOLPH3LQ9H4A5 285 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 FBXL5Q9UKA1 691 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ZNF18P17022 549 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 HIC1Q14526 733 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 CATSPER1Q8NEC5 780 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 BATF3Q9NR55 127 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ANAPC7Q9UJX3 599 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 CCDC15Q0P6D6 951 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 UBE3CQ15386 1083 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 DLGAP5Q15398 846 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 TBC1D23Q9NUY8 699 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 CCNL1Q9UK58 526 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
LAMA4-207ENST00000424408 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
LAMA4-207ENST00000424408 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 HSPA9P38646 679 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 CNGA3Q16281 694 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 KCTD1Q719H9 257 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 AS3MTQ9HBK9 375 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 TCP11X1B4DZS4 312 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 SNX2O60749 519 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 LARGE2Q8N3Y3 721 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 PIGSQ96S52 555 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 TMEM247A6NEH6 219 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 PJA2O43164 708 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 MDH1P40925 334 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 LRRC36Q1X8D7 754 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 CCNYL1Q8N7R7 359 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 GRAMD1AQ96CP6 724 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 NACC1Q96RE7 527 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 SLC13A1Q9BZW2 595 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 DDX47Q9H0S4 455 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 MIF4GDA9UHW6 222 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 CCDC22O60826 627 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 ATP1A1P05023 1023 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 RINLQ6ZS11 566 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 ERICH1Q86X53 443 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 BPIFA3Q9BQP9 254 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 LGALS16A8MUM7 142 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 PPP4R4Q6NUP7 873 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 SZRD1Q7Z422 152 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 DHX40Q8IX18 779 aaKnown RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 PPM1NQ8N819 430 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 LBHD1Q9BQE6 289 aaPredicted RBP12.91□□□□□ -0.34
LAMA4-207ENST00000424408 PARVGQ9HBI0 331 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 AKT3Q9Y243 479 aa12.91□□□□□ -0.34
LAMA4-207ENST00000424408 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.34
LAMA4-207ENST00000424408 TCP10L2B9ZVM9 353 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 SCNN1DP51172 638 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 KLC1Q07866 573 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 ASPRV1Q53RT3 343 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 COG1Q8WTW3 980 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 RBM41Q96IZ5 413 aaKnown RBP12.9□□□□□ -0.34
LAMA4-207ENST00000424408 SLC12A6Q9UHW9 1150 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 ZNF233A6NK53 670 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 WDR47O94967 919 aa12.9□□□□□ -0.34
LAMA4-207ENST00000424408 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
LAMA4-207ENST00000424408 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms