RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SMTNP53814 917 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 GABPAQ06546 454 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 PPP4R3AQ6IN85 833 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 CCDC121Q6ZUS5 278 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 FAM228AQ86W67 206 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 TRIM59Q8IWR1 403 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.09
MSH5-206ENST00000423982 SCFD2Q8WU76 684 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 RAPGEF5Q92565 580 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 EDEM3Q9BZQ6 932 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 GANQ9H2C0 597 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 PI4KBQ9UBF8 816 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 HACL1Q9UJ83 578 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 NOC2LQ9Y3T9 749 aaKnown RBP15.64■□□□□ 0.09
MSH5-206ENST00000423982 PCNTO95613 3336 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 TTI1O43156 1089 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 TRAPPC3O43617 180 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 COPB2P35606 906 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
MSH5-206ENST00000423982 MAGOHP61326 146 aaKnown RBP15.63■□□□□ 0.09
MSH5-206ENST00000423982 RASA3Q14644 834 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 MAGOHBQ96A72 148 aaKnown RBP15.63■□□□□ 0.09
MSH5-206ENST00000423982 ZNF287Q9HBT7 754 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 RIC8AQ9NPQ8 531 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 AJAP1Q9UKB5 411 aaPredicted RBP15.63■□□□□ 0.09
MSH5-206ENST00000423982 NR2E1Q9Y466 385 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 MYH7BA7E2Y1 1941 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 CNTNAP1P78357 1384 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 GOLGA6L7A0A1B0GV03 622 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 TMEM266Q2M3C6 531 aa15.63■□□□□ 0.09
MSH5-206ENST00000423982 ADAT2Q7Z6V5 191 aaKnown RBP15.63■□□□□ 0.09
MSH5-206ENST00000423982 RPS12P25398 132 aaKnown RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 TMEM119Q4V9L6 283 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 ANGEL2Q5VTE6 544 aaKnown RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 IRF2BP2Q7Z5L9 587 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 CEP57Q86XR8 500 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 GPC2Q8N158 579 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 SCFD1Q8WVM8 642 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 SYN2Q92777 582 aaPredicted RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 SEC16BQ96JE7 1060 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 GPRC5DQ9NZD1 345 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 KRIT1O00522 736 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 USP11P51784 963 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 CASP5P51878 434 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 ZNF280AP59817 542 aaPredicted RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 GJB7Q6PEY0 223 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 LRRC57Q8N9N7 239 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 HAS1Q92839 578 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 TRIM51Q9BSJ1 452 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 DHX36Q9H2U1 1008 aaKnown RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 BCAS3Q9H6U6 928 aa15.62■□□□□ 0.09
MSH5-206ENST00000423982 LUC7LQ9NQ29 371 aaKnown RBP15.62■□□□□ 0.09
MSH5-206ENST00000423982 CHUKO15111 745 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 ZBTB48P10074 688 aaPredicted RBP15.61■□□□□ 0.09
MSH5-206ENST00000423982 ADAM9Q13443 819 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 RRP1BQ14684 758 aaKnown RBP15.61■□□□□ 0.09
MSH5-206ENST00000423982 E2F5Q15329 346 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 ANKRD20A8PQ5CZ79 823 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 HERC4Q5GLZ8 1057 aaPredicted RBP15.61■□□□□ 0.09
MSH5-206ENST00000423982 DHX37Q8IY37 1157 aaKnown RBP15.61■□□□□ 0.09
MSH5-206ENST00000423982 SCLT1Q96NL6 688 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.61■□□□□ 0.09
MSH5-206ENST00000423982 AIPL1Q9NZN9 384 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 FOCADQ5VW36 1801 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 SOCS7O14512 581 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 ECM2O94769 699 aaPredicted RBP15.61■□□□□ 0.09
MSH5-206ENST00000423982 PPP2R2AP63151 447 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 JAG1P78504 1218 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 PRKG1Q13976 671 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 CERKLQ49MI3 558 aaPredicted RBP15.61■□□□□ 0.09
MSH5-206ENST00000423982 CYB5D1Q6P9G0 228 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 FUKQ8N0W3 1084 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 GPCPD1Q9NPB8 672 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 GGA3Q9NZ52 723 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 KIAA1024Q9UPX6 916 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 SBF1O95248 1867 aa15.61■□□□□ 0.09
MSH5-206ENST00000423982 POTEB3A0JP26 581 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 POTECB2RU33 542 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 ENTPD3O75355 529 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 CCDC172P0C7W6 258 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 HIRAP54198 1017 aaPredicted RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 DHX9Q08211 1270 aaKnown RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 KRT71Q3SY84 523 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 POTEBQ6S5H4 581 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 LRIG3Q6UXM1 1119 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 LZTS2Q9BRK4 669 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 NUCKS1Q9H1E3 243 aaKnown RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 NAGPAQ9UK23 515 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 PCDHA2Q9Y5H9 948 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 PGRMC1O00264 195 aaKnown RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 RDXP35241 583 aaKnown RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 PSMD2Q13200 908 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 UBAP2Q5T6F2 1119 aaKnown RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 ARFGAP2Q8N6H7 521 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 C1orf131Q8NDD1 294 aaKnown RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 FAM151AQ8WW52 585 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms