RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SUPT20HQ8NEM7 779 aa7.11□□□□□ -1.27
LINC00458-201ENST00000423442 FAM89AQ96GI7 184 aa7.11□□□□□ -1.27
LINC00458-201ENST00000423442 BORCS6Q96GS4 357 aa7.11□□□□□ -1.27
LINC00458-201ENST00000423442 PHAXQ9H814 394 aaKnown RBP7.11□□□□□ -1.27
LINC00458-201ENST00000423442 UBN2Q6ZU65 1347 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 SHTN1A0MZ66 631 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 NTSR2O95665 410 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
LINC00458-201ENST00000423442 DBHP09172 617 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 ACRP10323 421 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 ATF2P15336 505 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 ZNF165P49910 485 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 VWA3BQ502W6 1294 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 HABP4Q5JVS0 413 aaKnown RBP7.1□□□□□ -1.27
LINC00458-201ENST00000423442 JAMLQ86YT9 394 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 TSPYL6Q8N831 410 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 ZBTB38Q8NAP3 1195 aaPredicted RBP7.1□□□□□ -1.27
LINC00458-201ENST00000423442 CCDC191Q8NCU4 936 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 GCC1Q96CN9 775 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 MYD88Q99836 296 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 BCL2L13Q9BXK5 485 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 VPS33BQ9H267 617 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
LINC00458-201ENST00000423442 PRR13Q9NZ81 148 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 SUCOQ9UBS9 1254 aaKnown RBP7.1□□□□□ -1.27
LINC00458-201ENST00000423442 SUSD2Q9UGT4 822 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 ZNRF3Q9ULT6 936 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 MAP3K2Q9Y2U5 619 aa7.1□□□□□ -1.27
LINC00458-201ENST00000423442 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
LINC00458-201ENST00000423442 PI4KAP2A4QPH2 592 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 H0Y8X5 98 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 RAD17O75943 681 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 FOXO4P98177 505 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 CAP1Q01518 475 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 EXOSC9Q06265 439 aaKnown RBP7.09□□□□□ -1.27
LINC00458-201ENST00000423442 SPATS1Q496A3 300 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 TDRD10Q5VZ19 366 aaKnown RBP7.09□□□□□ -1.27
LINC00458-201ENST00000423442 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 PAQR3Q6TCH7 311 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 DPP8Q6V1X1 898 aaPredicted RBP7.09□□□□□ -1.27
LINC00458-201ENST00000423442 LRP10Q7Z4F1 713 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 CCDC144CPQ8IYA2 1237 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 PI4KAP1Q8N8J0 262 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 FNIP1Q8TF40 1166 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 NKD1Q969G9 470 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 CNOT7Q9UIV1 285 aaKnown RBP7.09□□□□□ -1.27
LINC00458-201ENST00000423442 ATP6V0A2Q9Y487 856 aa7.09□□□□□ -1.27
LINC00458-201ENST00000423442 POLR2AP24928 1970 aaKnown RBP7.09□□□□□ -1.27
LINC00458-201ENST00000423442 ANKRD36CQ5JPF3 1778 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 H7C1D1 291 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 CCER2I3L3R5 266 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 PDE8AO60658 829 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 VAMP4O75379 141 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 CYBBP04839 570 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 PCCAP05165 728 aaPredicted RBP7.08□□□□□ -1.28
LINC00458-201ENST00000423442 RPS8P62241 208 aaKnown RBP7.08□□□□□ -1.28
LINC00458-201ENST00000423442 TARBP2Q15633 366 aaKnown RBP7.08□□□□□ -1.28
LINC00458-201ENST00000423442 ZXDCQ2QGD7 858 aaPredicted RBP7.08□□□□□ -1.28
LINC00458-201ENST00000423442 CCDC152Q4G0S7 254 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 DCAF15Q66K64 600 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 CWF19L1Q69YN2 538 aaKnown RBP7.08□□□□□ -1.28
LINC00458-201ENST00000423442 BICRALQ6AI39 1079 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 SLITRK4Q8IW52 837 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 C2orf69Q8N8R5 385 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 BRF1Q92994 677 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 SPATA25Q9BR10 227 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 ISCA1Q9BUE6 129 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 GBA2Q9HCG7 927 aaPredicted RBP7.08□□□□□ -1.28
LINC00458-201ENST00000423442 RIC1Q4ADV7 1423 aa7.08□□□□□ -1.28
LINC00458-201ENST00000423442 CDHR2Q9BYE9 1310 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 A0A1W2PQJ5 194 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 ADM5C9JUS6 153 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 SRGAP3O43295 1099 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 INSRRP14616 1297 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 TACR1P25103 407 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 PRR5P85299 388 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 GRAPQ13588 217 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 TNIP1Q15025 636 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 SF3B3Q15393 1217 aaKnown RBP7.07□□□□□ -1.28
LINC00458-201ENST00000423442 NT5DC1Q5TFE4 455 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 LIPIQ6XZB0 460 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 HS2ST1Q7LGA3 356 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 KRT26Q7Z3Y9 468 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 FERMT3Q86UX7 667 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 GRAPLQ8TC17 118 aaPredicted RBP7.07□□□□□ -1.28
LINC00458-201ENST00000423442 DHRS1Q96LJ7 313 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 EYA3Q99504 573 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 TMPRSS5Q9H3S3 457 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 PDLIM7Q9NR12 457 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 HDAC9Q9UKV0 1011 aa7.07□□□□□ -1.28
LINC00458-201ENST00000423442 FANCIQ9NVI1 1328 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 YDJCA8MPS7 323 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 E9PSI1 815 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 F8W031 263 aaPredicted RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 FGF10O15520 208 aaPredicted RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 TBC1D8O95759 1140 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 MC3RP41968 323 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 FXR1P51114 621 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 ZNF445P59923 1031 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms