RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 GADD45BO75293 160 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-202ENST00000422991 PLA2G4BP0C869 781 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 CYP2C9P11712 490 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 NDUFA8P51970 172 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 POLGP54098 1239 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-202ENST00000422991 SLC12A3P55017 1021 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 FAAP100Q0VG06 881 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 EMC2Q15006 297 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 TPRNQ4KMQ1 711 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 SYT2Q8N9I0 419 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-202ENST00000422991 SLC7A3Q8WY07 619 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 LARP4BQ92615 738 aaKnown RBP18.92■□□□□ 0.62
COL7A1-202ENST00000422991 DHX38Q92620 1227 aaKnown RBP18.92■□□□□ 0.62
COL7A1-202ENST00000422991 WNT8BQ93098 351 aa18.92■□□□□ 0.62
COL7A1-202ENST00000422991 SIP14410 1827 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 SMIM35A0A1B0GVV1 85 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 POLR2DO15514 142 aaKnown RBP18.91■□□□□ 0.62
COL7A1-202ENST00000422991 USO1O60763 962 aaKnown RBP18.91■□□□□ 0.62
COL7A1-202ENST00000422991 DGAT1O75907 488 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 CLTBP09497 229 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 MCM6Q14566 821 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 TRIM71Q2Q1W2 868 aaKnown RBP18.91■□□□□ 0.62
COL7A1-202ENST00000422991 TAF2Q6P1X5 1199 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 PADI6Q6TGC4 694 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 EXOC8Q8IYI6 725 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 LRRC71Q8N4P6 559 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 IQUBQ8NA54 791 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 RETREG2Q8NC44 543 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 DHX58Q96C10 678 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 JPH2Q9BR39 696 aaPredicted RBP18.91■□□□□ 0.62
COL7A1-202ENST00000422991 PYM1Q9BRP8 204 aaKnown RBP18.91■□□□□ 0.62
COL7A1-202ENST00000422991 RUSC1Q9BVN2 902 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 ATP6V0A4Q9HBG4 840 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 XPNPEP1Q9NQW7 623 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 PDLIM7Q9NR12 457 aa18.91■□□□□ 0.62
COL7A1-202ENST00000422991 GAS2O43903 313 aaKnown RBP18.9■□□□□ 0.62
COL7A1-202ENST00000422991 SSBP05455 408 aaKnown RBP eCLIP18.9■□□□□ 0.62
COL7A1-202ENST00000422991 CLCN3P51790 818 aa18.9■□□□□ 0.62
COL7A1-202ENST00000422991 EFCAB12Q6NXP0 572 aa18.9■□□□□ 0.62
COL7A1-202ENST00000422991 METTL13Q8N6R0 699 aa18.9■□□□□ 0.62
COL7A1-202ENST00000422991 CUEDC2Q9H467 287 aa18.9■□□□□ 0.62
COL7A1-202ENST00000422991 BMP2KQ9NSY1 1161 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-202ENST00000422991 TBX21Q9UL17 535 aa18.9■□□□□ 0.62
COL7A1-202ENST00000422991 LTBP2Q14767 1821 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 PRPF40AO75400 957 aaKnown RBP18.89■□□□□ 0.61
COL7A1-202ENST00000422991 CYP11B2P19099 503 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 SYKP43405 635 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 UBE2HP62256 183 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 RBL2Q08999 1139 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 MKRN4PQ13434 485 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-202ENST00000422991 RINT1Q6NUQ1 792 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 C1orf186Q6ZWK4 172 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 RPAINQ86UA6 219 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 GPBP1Q86WP2 473 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 KIAA0319LQ8IZA0 1049 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 MCPH1Q8NEM0 835 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 MTRQ99707 1265 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 FAM49AQ9H0Q0 323 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-202ENST00000422991 SUGCTQ9HAC7 445 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 MAGEF1Q9HAY2 307 aa18.89■□□□□ 0.61
COL7A1-202ENST00000422991 ACTN4O43707 911 aaKnown RBP18.88■□□□□ 0.61
COL7A1-202ENST00000422991 RPLP2P05387 115 aaKnown RBP18.88■□□□□ 0.61
COL7A1-202ENST00000422991 TMOD1P28289 359 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 FAM160A1Q05DH4 1040 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 DRP2Q13474 957 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
COL7A1-202ENST00000422991 C7orf61Q8IZ16 206 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 CCDC155Q8N6L0 562 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 CAGE1Q8TC20 777 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 DNAJB3Q8WWF6 145 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 NOC4LQ9BVI4 516 aaKnown RBP18.88■□□□□ 0.61
COL7A1-202ENST00000422991 KCND2Q9NZV8 630 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 USP25Q9UHP3 1055 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 MYH11P35749 1972 aa18.88■□□□□ 0.61
COL7A1-202ENST00000422991 GOLGA6L22H0YM25 854 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 KIAA0355O15063 1070 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 CAND2O75155 1236 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 SLFN14P0C7P3 912 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 GUCY2CP25092 1073 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 DNM2P50570 870 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 ARSHQ5FYA8 562 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 HABP4Q5JVS0 413 aaKnown RBP18.87■□□□□ 0.61
COL7A1-202ENST00000422991 SV2BQ7L1I2 683 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 SH3RF1Q7Z6J0 888 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 FMR1NBQ8N0W7 255 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-202ENST00000422991 ENGASEQ8NFI3 743 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 TCP11Q8WWU5 503 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 TMEM143Q96AN5 459 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 MAP7D2Q96T17 732 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 TNMDQ9H2S6 317 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 HIPK3Q9H422 1215 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 TMEM39AQ9NV64 488 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 KBTBD4Q9NVX7 518 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 SERTAD1Q9UHV2 236 aa18.87■□□□□ 0.61
COL7A1-202ENST00000422991 COLQQ9Y215 455 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-202ENST00000422991 PITPNM1O00562 1244 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 CKBP12277 381 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 LIG1P18858 919 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 THPOP40225 353 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms