RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 OXSR1O95747 527 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 SERPINC1P01008 464 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 HOXC9P31274 260 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 KIF11P52732 1056 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 OCLNQ16625 522 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ZNF746Q6NUN9 644 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 TRAPPC11Q7Z392 1133 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 GRAMD2AQ8IUY3 354 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 RUBCNQ92622 972 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ZSCAN31Q96LW9 406 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 MMS19Q96T76 1030 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 LRRC27Q9C0I9 530 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 GBA3Q9H227 469 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ZNF304Q9HCX3 659 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 AGAP1Q9UPQ3 857 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ADAMTSL1Q8N6G6 1762 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 HMGB1P1B2RPK0 211 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 RFC4P35249 363 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ADKP55263 362 aaKnown RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 LACTBP83111 547 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 PDCD4Q53EL6 469 aaKnown RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 C6orf183Q5T699 404 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 CYP4X1Q8N118 509 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ARFGAP2Q8N6H7 521 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 PDILTQ8N807 584 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ATP6V1G3Q96LB4 118 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 NDEL1Q9GZM8 345 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 JADE2Q9NQC1 790 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ZMYND8Q9ULU4 1186 aaPredicted RBP9.38□□□□□ -0.91
SSB-205ENST00000422006 SNX14Q9Y5W7 946 aa9.38□□□□□ -0.91
SSB-205ENST00000422006 ZNF233A6NK53 670 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 LCA5LO95447 670 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CYP1A2P05177 515 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 SLC16A2P36021 539 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 GJA5P36382 358 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 EPHB4P54760 987 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 ATP8B2P98198 1209 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
SSB-205ENST00000422006 CRY1Q16526 586 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 PTPN21Q16825 1174 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 EMBQ6PCB8 327 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 OSTM1Q86WC4 334 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 ANKMY2Q8IV38 441 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CD302Q8IX05 232 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 SLAIN1Q8ND83 568 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CAVIN3Q969G5 261 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CCDC42Q96M95 316 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 TAF1DQ9H5J8 278 aaPredicted RBP9.37□□□□□ -0.91
SSB-205ENST00000422006 AS3MTQ9HBK9 375 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 INTS13Q9NVM9 706 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 SAGE1Q9NXZ1 904 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 RASAL2Q9UJF2 1139 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
SSB-205ENST00000422006 MAGEA13PA6NCF6 341 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 IGF2BP3O00425 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
SSB-205ENST00000422006 MAGEB3O15480 346 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 ZBED4O75132 1171 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 ASMTLO95671 621 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 PAEPP09466 180 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 GYS1P13807 737 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 DRD4P21917 467 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 GBP1P32455 592 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 NCALDP61601 193 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CLDN10P78369 228 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 TBL3Q12788 808 aaKnown RBP9.37□□□□□ -0.91
SSB-205ENST00000422006 PAK2Q13177 524 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CFAP58Q5T655 872 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 RAD9BQ6WBX8 426 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CACNA2D4Q7Z3S7 1137 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 TTLL6Q8N841 843 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CCDC197Q8NCU1 140 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 MKNK1Q9BUB5 465 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 FAIMQ9NVQ4 179 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 CTTNBP2NLQ9P2B4 639 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 SLC12A6Q9UHW9 1150 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 NOX1Q9Y5S8 564 aa9.37□□□□□ -0.91
SSB-205ENST00000422006 A0A1W2PP64 1363 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 LINC00854A0A1B0GVQ3 168 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 ERVV-2B6SEH9 535 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 SPTLC2O15270 562 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 DGKIO75912 1065 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 KRT16P08779 473 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 MSH2P43246 934 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 SERPINB8P50452 374 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 KIF22Q14807 665 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 RABL6Q3YEC7 729 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms