RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 TBC1D22BQ9NU19 505 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 MAFBQ9Y5Q3 323 aaPredicted RBP19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 WDR81Q562E7 1941 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 GPR32O75388 356 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 ATF7P17544 494 aaPredicted RBP19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 LAG3P18627 525 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 RCAN1P53805 252 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 ZXDAP98168 799 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 DSC3Q14574 896 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 PKN1Q16512 942 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 DUSP6Q16828 381 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 TSGA10IPQ3SY00 556 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 MCTP2Q6DN12 878 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 ZNF746Q6NUN9 644 aaPredicted RBP19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 CKAP2LQ8IYA6 745 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 SUSD6Q92537 303 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 PBXIP1Q96AQ6 731 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 OSMRQ99650 979 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 ZNF577Q9BSK1 485 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 CWH43Q9H720 699 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 HCSTQ9UBK5 93 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 LZTS1Q9Y250 596 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 TRIOO75962 3097 aa19.14■□□□□ 0.65
UPF3AP3-201ENST00000420996 KLF18A0A0U1RQI7 1052 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 FSCN2O14926 492 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 CDC27P30260 824 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 RBM10P98175 930 aaKnown RBP19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 PFKFB3Q16875 520 aaPredicted RBP19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 TMEM184AQ6ZMB5 413 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 SMAP1Q8IYB5 467 aaPredicted RBP19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 METTL13Q8N6R0 699 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 VN1R2Q8NFZ6 395 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 PPP1R16BQ96T49 567 aa19.13■□□□□ 0.65
UPF3AP3-201ENST00000420996 WDFY4Q6ZS81 3184 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 ESYT2A0FGR8 921 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 VTNP04004 478 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 PSAPP07602 524 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 FGFR1P11362 822 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 PLCB3Q01970 1234 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 ADCK5Q3MIX3 580 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 RASEFQ8IZ41 740 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 RASGRP4Q8TDF6 673 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 MRPS27Q92552 414 aaKnown RBP19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 RPGRIP1Q96KN7 1286 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 ZMYND12Q9H0C1 365 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 TMEM117Q9H0C3 514 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 PUF60Q9UHX1 559 aaKnown RBP19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 CEP131Q9UPN4 1083 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 PCDHA10Q9Y5I2 948 aa19.12■□□□□ 0.65
UPF3AP3-201ENST00000420996 MAGEB2O15479 319 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 HOXA2O43364 376 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 SRGAP2BP0DMP2 458 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 KCNC3Q14003 757 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 KRT32Q14532 448 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 BMP2KLQ5H9B9 411 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 ZNF710Q8N1W2 664 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 CASD1Q96PB1 797 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 PRRX2Q99811 253 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 TCEAL9Q9UHQ7 104 aa19.11■□□□□ 0.65
UPF3AP3-201ENST00000420996 CCDC196A0A1B0GTZ2 297 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 HMGB1P09429 215 aaKnown RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 ADD1P35611 737 aaKnown RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 NLRP11P59045 1033 aaKnown RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 PLPP4Q5VZY2 271 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 TRMT1LQ7Z2T5 733 aaKnown RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 SUGP1Q8IWZ8 645 aaKnown RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 FBXL6Q8N531 539 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 PRSS33Q8NF86 280 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 CCDC12Q8WUD4 166 aaPredicted RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 FAM167AQ96KS9 214 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 S1PR5Q9H228 398 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 C6orf50Q9HD87 102 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 NGRNQ9NPE2 291 aaKnown RBP19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 GABBR1Q9UBS5 961 aa19.1■□□□□ 0.65
UPF3AP3-201ENST00000420996 ADAMTS3O15072 1205 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 ZSCAN20P17040 1043 aaPredicted RBP19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 EIF4BP23588 611 aaKnown RBP19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 TMOD1P28289 359 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 CLCN3P51790 818 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 PTPN5P54829 565 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 SIGLEC14Q08ET2 396 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 APOBRQ0VD83 1088 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 IER5LQ5T953 404 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 EFCAB12Q6NXP0 572 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 ANKRD54Q6NXT1 300 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 KCNT2Q6UVM3 1135 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 LRRC55Q6ZSA7 311 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 REXO1Q8N1G1 1221 aaKnown RBP19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 ADAMTS10Q9H324 1103 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 RNF19AQ9NV58 838 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 AKT3Q9Y243 479 aa19.09■□□□□ 0.65
UPF3AP3-201ENST00000420996 KMT2EQ8IZD2 1858 aa19.08■□□□□ 0.65
UPF3AP3-201ENST00000420996 HOXB8P17481 243 aaPredicted RBP19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 GNA11P29992 359 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 CIITAP33076 1130 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 PPM1AP35813 382 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 TECP42680 631 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms