RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ATP23Q9Y6H3 246 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 C4BPAP04003 597 aaKnown RBP4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 MC4RP32245 332 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 GJA4P35212 333 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 MRE11P49959 708 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 ST5P78524 1137 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 CRHR2Q13324 411 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 FIGNQ5HY92 759 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 KANK2Q63ZY3 851 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 Q6ZPA2 131 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 FILIP1Q7Z7B0 1213 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 SGMS1Q86VZ5 419 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 PTRH1Q86Y79 214 aaKnown RBP4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 HOMER1Q86YM7 354 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 TMPRSS6Q8IU80 811 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 DNAJC10Q8IXB1 793 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 RTKN2Q8IZC4 609 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 PCDH19Q8TAB3 1148 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 FBXW5Q969U6 566 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 BTBD2Q9BX70 525 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 FAM184BQ9ULE4 1060 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 DMRT1Q9Y5R6 373 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 PCSK5Q92824 1860 aa4.79□□□□□ -1.64
SDCBPP3-201ENST00000419629 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 PMS2P1A4D2B8 440 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 PLD2O14939 933 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 C6orf222P0C671 652 aaPredicted RBP4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 KRT4P19013 534 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 JAM2P57087 298 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 HERVK_113P62684 666 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 CD83Q01151 205 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 SEC23AQ15436 765 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 TRIM61Q5EBN2 209 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 TAF7LQ5H9L4 462 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 LRSAM1Q6UWE0 723 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 ZC3H7AQ8IWR0 971 aaKnown RBP4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 FAM9AQ8IZU1 332 aaPredicted RBP4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 THEMISQ8N1K5 641 aaPredicted RBP4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 OR14K1Q8NGZ2 314 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 CLIP3Q96DZ5 547 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 PIF1Q9H611 641 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 NCOA5Q9HCD5 579 aaKnown RBP4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 CATSPERZQ9NTU4 200 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 CBLCQ9ULV8 474 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 GIT1Q9Y2X7 761 aa4.78□□□□□ -1.64
SDCBPP3-201ENST00000419629 A0A0G2JNJ9 132 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 B4E1Z4 1266 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 ARVCFO00192 962 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 CYP27B1O15528 508 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 SLC26A4O43511 780 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 NPTXRO95502 500 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 PYGMP11217 842 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 ECE1P42892 770 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 TCEA2Q15560 299 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 FNDC3BQ53EP0 1204 aaKnown RBP4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 TMEM200BQ69YZ2 307 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 C16orf59Q7L2K0 433 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 ULK2Q8IYT8 1036 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 D2HGDHQ8N465 521 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 APPBP2Q92624 585 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 ZG16BQ96DA0 208 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 SLC52A2Q9HAB3 445 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 SLC2A4RGQ9NR83 387 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 PARPBPQ9NWS1 579 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 TMEM260Q9NX78 707 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 Q9UFV3 132 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 PCDHA8Q9Y5H6 950 aa4.77□□□□□ -1.65
SDCBPP3-201ENST00000419629 CAPN14A8MX76 684 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 ZNF561-AS1K7EIQ3 104 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 KCNQ2O43526 872 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 CRTAMO95727 393 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 PEX11BO96011 259 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 KRT15P19012 456 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 FLT3P36888 993 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 MOGSQ13724 837 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 RRP1BQ14684 758 aaKnown RBP4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 CRY1Q16526 586 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 GSTCDQ8NEC7 633 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 SHCBP1Q8NEM2 672 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 TMEM176AQ96HP8 235 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 CRAMP1Q96RY5 1269 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 PRRX2Q99811 253 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 OR10A5Q9H207 317 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 SMURF1Q9HCE7 757 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 UCKL1Q9NWZ5 548 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 TMA7Q9Y2S6 64 aaKnown RBP4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 PCDHA9Q9Y5H5 950 aa4.76□□□□□ -1.65
SDCBPP3-201ENST00000419629 CLASP2O75122 1294 aaKnown RBP4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 CDC45O75419 566 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 SRGAP2CP0DJJ0 459 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 COL10A1Q03692 680 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 SQSTM1Q13501 440 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 C16orf86Q6ZW13 317 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 BRAPQ7Z569 592 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 DDX53Q86TM3 631 aaKnown RBP4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 RNPC3Q96LT9 517 aaKnown RBP4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 ANP32EQ9BTT0 268 aa4.75□□□□□ -1.65
SDCBPP3-201ENST00000419629 CLSPNQ9HAW4 1339 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms