RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TUBGCP5Q96RT8 1024 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 A0A0G2JNJ9 132 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 B4GALT4O60513 344 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 MAFO75444 373 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 EYA4O95677 639 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 PHC1P78364 1004 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 ROM1Q03395 351 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 LRRC32Q14392 662 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 ZNF827Q17R98 1081 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 ZBTB41Q5SVQ8 909 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 UBXN11Q5T124 520 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 TRIM68Q6AZZ1 485 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 GRAMD4Q6IC98 578 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 LILRA6Q6PI73 481 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 DDX46Q7L014 1031 aaKnown RBP6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 OTOP2Q7RTS6 562 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 KANSL1Q7Z3B3 1105 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 KRT26Q7Z3Y9 468 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 RALYLQ86SE5 291 aaKnown RBP6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 SSBP3Q9BWW4 388 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 MEGF9Q9H1U4 602 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 Q9UFV3 132 aa6.37□□□□□ -1.39
HMGB1P49-201ENST00000418882 CUTAO60888 179 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 PRPF6O94906 941 aaKnown RBP6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 HMGCRP04035 888 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 SOX5P35711 763 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 USP10Q14694 798 aaKnown RBP6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 SART3Q15020 963 aaKnown RBP6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 TAF7LQ5H9L4 462 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 BROXQ5VW32 411 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 BORAQ6PGQ7 559 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 FAM124AQ86V42 546 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 OR5AN1Q8NGI8 311 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 USP7Q93009 1102 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 CARD11Q9BXL7 1154 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 PPP4R1LQ9P1A2 415 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 MSRAQ9UJ68 235 aa6.36□□□□□ -1.39
HMGB1P49-201ENST00000418882 MATN2O00339 956 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 FOXD2O60548 495 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 APOL3O95236 402 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 CD40P25942 277 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 PCOLCEQ15113 449 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 GPR158Q5T848 1215 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 FILIP1Q7Z7B0 1213 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 PHYKPLQ8IUZ5 450 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 C7orf31Q8N865 590 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 ZNF610Q8N9Z0 462 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 SLC5A5Q92911 643 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 E2F7Q96AV8 911 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 BDH2Q9BUT1 245 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 PRDM12Q9H4Q4 367 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 IFT22Q9H7X7 185 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 VTA1Q9NP79 307 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 FBXO10Q9UK96 956 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 SLC4A7Q9Y6M7 1214 aa6.35□□□□□ -1.39
HMGB1P49-201ENST00000418882 PLATP00750 562 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 EPHB4P54760 987 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 ADCY1Q08828 1119 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 STAT4Q14765 748 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 DDB1Q16531 1140 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 LIMS2Q7Z4I7 341 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 NME9Q86XW9 330 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 WDR48Q8TAF3 677 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 CXorf38Q8TB03 319 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 CFHR4Q92496 578 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 RELTQ969Z4 430 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 TTC1Q99614 292 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 PITHD1Q9GZP4 211 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 HAPLN2Q9GZV7 340 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 MTG2Q9H4K7 406 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 PPP2R3BQ9Y5P8 575 aa6.34□□□□□ -1.39
HMGB1P49-201ENST00000418882 A0A0A6YYK5 440 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 CLSTN1O94985 981 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 CELA3BP08861 270 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 MRE11P49959 708 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 PPP2CBP62714 309 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 PPP2CAP67775 309 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 OCRLQ01968 901 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 ACAP1Q15027 740 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 PDCD1Q15116 288 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 AGBL4Q5VU57 503 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 KIAA1841Q6NSI8 718 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 PASD1Q8IV76 773 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 ZZZ3Q8IYH5 903 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 NKD2Q969F2 451 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 SOX7Q9BT81 388 aa6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 TOPORSQ9NS56 1045 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P49-201ENST00000418882 LOC105371045A0A1W2PR82 267 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 GPR42O15529 346 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 OPHN1O60890 802 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 ITGB3P05106 788 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms