RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PMFBP1Q8TBY8 1022 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 FBXW5Q969U6 566 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 EXOC2Q96KP1 924 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 SRPK1Q96SB4 655 aaKnown RBP5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 RIC8BQ9NVN3 520 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 NDOR1Q9UHB4 597 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 NRXN3Q9Y4C0 1643 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 PCDHA9Q9Y5H5 950 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 DIP2AQ14689 1571 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 FAM221BA6H8Z2 402 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 LAMTOR5O43504 91 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 APPP05067 770 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 CENPBP07199 599 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 ENO2P09104 434 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 PYGMP11217 842 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 DNM2P50570 870 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 GABREP78334 506 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 NFKB2Q00653 900 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 NFATC3Q12968 1075 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 SURF1Q15526 300 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 HABP4Q5JVS0 413 aaKnown RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 CD276Q5ZPR3 534 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 PTRH1Q86Y79 214 aaKnown RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZC3H7AQ8IWR0 971 aaKnown RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 CHST13Q8NET6 341 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 NUDT10Q8NFP7 164 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 PCDH19Q8TAB3 1148 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 NUDT11Q96G61 164 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 BORCS6Q96GS4 357 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 DHRS4Q9BTZ2 278 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 SLC39A2Q9NP94 309 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 SNTG2Q9NY99 539 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 HSPBP1Q9NZL4 362 aa5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 CNOT11Q9UKZ1 510 aaKnown RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 MRPS23Q9Y3D9 190 aaKnown RBP5.09□□□□□ -1.59
HMGB3P20-201ENST00000417997 DISP3Q9P2K9 1392 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 CENPJQ9HC77 1338 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZNF839A8K0R7 811 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ACOT7O00154 380 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 KCNK3O14649 394 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 B4GALT4O60513 344 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 CRTAMO95727 393 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 C6orf222P0C671 652 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 INSRRP14616 1297 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 PDE6AP16499 860 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 NAT1P18440 290 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 MAGEA10P43363 369 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 SERINC3Q13530 473 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 GPR19Q15760 415 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 SMAD2Q15796 467 aaKnown RBP5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 FAM47CQ5HY64 1035 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ARHGEF18Q6ZSZ5 1173 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 OSTM1Q86WC4 334 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 NLGN4XQ8N0W4 816 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 KLHL36Q8N4N3 616 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 IGDCC4Q8TDY8 1250 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 C8orf49Q96NF6 230 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 DNAJC7Q99615 494 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 TACO1Q9BSH4 297 aaKnown RBP5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ARHGAP28Q9P2N2 729 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 SRPK3Q9UPE1 567 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ATP23Q9Y6H3 246 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 ITSN1Q15811 1721 aa5.08□□□□□ -1.6
HMGB3P20-201ENST00000417997 SLIT1O75093 1534 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 CPS1P31327 1500 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 DLC1Q96QB1 1528 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 SBNO2Q9Y2G9 1366 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 TCRBV5S4A2TA0A5A2 114 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 CCDC66A2RUB6 948 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 GSTA4O15217 222 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 PTPN1P18031 435 aaKnown RBP5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 EPHA5P54756 1037 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 RASA3Q14644 834 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 PUM1Q14671 1186 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 CRY1Q16526 586 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 GPR155Q7Z3F1 870 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 RALYLQ86SE5 291 aaKnown RBP5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 GGNQ86UU5 652 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 CISD2Q8N5K1 135 aaKnown RBP5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 SH3RF2Q8TEC5 729 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 ARMC5Q96C12 935 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 MBD6Q96DN6 1003 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 RBM15Q96T37 977 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 C14orf93Q9H972 538 aaKnown RBP5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 ST6GALNAC2Q9UJ37 374 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 CBLCQ9ULV8 474 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 TULP4Q9NRJ4 1543 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 PTPRMP28827 1452 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 KIF20BQ96Q89 1820 aa5.07□□□□□ -1.6
HMGB3P20-201ENST00000417997 YTHDC2Q9H6S0 1430 aaKnown RBP5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 ANKRD26Q9UPS8 1709 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 TMEM2Q9UHN6 1383 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 USP32Q8NFA0 1604 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms