RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SORCS3Q9UPU3 1222 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 COL1A2P08123 1366 aa8.96□□□□□ -0.98
HLA-DPA1-241ENST00000417724 IGKV6D-21A0A0A0MT36 114 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 hCG_1642624A0A1W2PR95 340 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 HIDE1A8MVS5 230 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PDGFBP01127 241 aaPredicted RBP8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FGFR1P11362 822 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SP100P23497 879 aaPredicted RBP8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PDE4AP27815 886 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF76P36508 570 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 LIFRP42702 1097 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ITGB3BPQ13352 177 aaPredicted RBP8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 KIZQ2M2Z5 673 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PDXDC2PQ6P474 469 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ABHD15Q6UXT9 468 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CKAP2LQ8IYA6 745 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ABI1Q8IZP0 508 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 METTL13Q8N6R0 699 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MRPL43Q8N983 215 aaKnown RBP8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FANCBQ8NB91 859 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMEM40Q8WWA1 233 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CASP10Q92851 521 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF558Q96NG5 402 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 AGO4Q9HCK5 861 aaKnown RBP8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF302Q9NR11 478 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SLC12A7Q9Y666 1083 aa8.95□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PLXNA3P51805 1871 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SH2B2O14492 632 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SGSM2O43147 1006 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 BRD1O95696 1058 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CCNE2O96020 404 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 GSPT1P15170 499 aaKnown RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZSCAN20P17040 1043 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RXRAP19793 462 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NBL1P41271 181 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MTHFRP42898 656 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NAPAP54920 295 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DSC3Q14574 896 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SMC1AQ14683 1233 aaKnown RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ASTLQ6HA08 431 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SWSAP1Q6NVH7 229 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MIS18BP1Q6P0N0 1132 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SYNE3Q6ZMZ3 975 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 LRRC55Q6ZSA7 311 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NIPA1Q7RTP0 329 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FAM228AQ86W67 206 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 LRRC43Q8N309 656 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PLCD3Q8N3E9 789 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMEM87AQ8NBN3 555 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 BBXQ8WY36 941 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CASD1Q96PB1 797 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 OSMRQ99650 979 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 GLT8D2Q9H1C3 349 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RIC8AQ9NPQ8 531 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RBM8AQ9Y5S9 174 aaKnown RBP8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 HCFC2Q9Y5Z7 792 aa8.94□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PRR23AA6NEV1 266 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 C2orf71A6NGG8 1288 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZBTB42B2RXF5 422 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 C2CD4DB7Z1M9 353 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DDX39AO00148 427 aaKnown RBP8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MAGEB2O15479 319 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 GPR32O75388 356 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 C22orf31O95567 290 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 EOMESO95936 686 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 VTNP04004 478 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMOD1P28289 359 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SREBF1P36956 1147 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ALDH7A1P49419 539 aaKnown RBP8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CLCN5P51795 746 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ADCY7P51828 1080 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ATAT1Q5SQI0 421 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMTC3Q6ZXV5 915 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ASCL5Q7RTU5 278 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PLA2G4DQ86XP0 818 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CCDC60Q8IWA6 550 aaPredicted RBP8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZDHHC14Q8IZN3 488 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMEM105Q8N8V8 129 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NKD2Q969F2 451 aaPredicted RBP8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PPP1R16BQ96T49 567 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ANO3Q9BYT9 981 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MFSD1Q9H3U5 465 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 POMKQ9H5K3 350 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CEP131Q9UPN4 1083 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CARNS1A5YM72 827 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SMCO2A6NFE2 343 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 hCG_1984214I3L0E3 225 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 IPO5O00410 1097 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DHX15O43143 795 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CLASP2O75122 1294 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CXCL14O95715 111 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ATP4AP20648 1035 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 EIF4BP23588 611 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CA8P35219 290 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PBX3P40426 434 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NLRP11P59045 1033 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms