RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 IPPQ9Y573 584 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 H3BRJ5 948 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 JAK2O60674 1132 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 XRCC5P13010 732 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 ATF3P18847 181 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 NAPAP54920 295 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 WAPLQ7Z5K2 1190 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 TRIM59Q8IWR1 403 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 MICU2Q8IYU8 434 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 TTC25Q96NG3 672 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 BPIFA3Q9BQP9 254 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 ZNF180Q9UJW8 692 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 L3MBTL1Q9Y468 752 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 DTNAQ9Y4J8 743 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 ZBTB7BO15156 539 aaPredicted RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 AXIN1O15169 862 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 SEMA3DO95025 777 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 HLA-DPA1P20036 260 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 PDAP1Q13442 181 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 NYAP1Q6ZVC0 841 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 LPCAT2Q7L5N7 544 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 RIN2Q8WYP3 895 aaPredicted RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 L1RE1Q9UN81 338 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 HBS1LQ9Y450 684 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 E9PCH4 1651 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 STX7O15400 261 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 FTCDO95954 541 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 CPP00450 1065 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 MORF4L2Q15014 288 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 MCM10Q7L590 875 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 GATAD2AQ86YP4 633 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 CMTM5Q96DZ9 223 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 PLIN2Q99541 437 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 BHMT2Q9H2M3 363 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 TMEM245Q9H330 911 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 SLITRK6Q9H5Y7 841 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 SETBP1Q9Y6X0 1596 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 GNAT3A8MTJ3 354 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 O00370 1275 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 HNRNPRO43390 633 aaKnown RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 TBC1D12O60347 775 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 DTNBO60941 627 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 SLC4A1P02730 911 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 CDH3P22223 829 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 RFC5P40937 340 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 TTC17Q96AE7 1141 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 RBM41Q96IZ5 413 aaKnown RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 NLRP4Q96MN2 994 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 TRIM45Q9H8W5 580 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 EXOC7Q9UPT5 735 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 TMED5Q9Y3A6 229 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 PCDHA13Q9Y5I0 950 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 KDRP35968 1356 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 CHN1P15882 459 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 ZNF827Q17R98 1081 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 WASHC2DQ5SRD0 308 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 WLSQ5T9L3 541 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 E4F1Q66K89 784 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 ACAD11Q709F0 780 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 VTI1AQ96AJ9 217 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ANKRD36BP1Q96IX9 119 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 VPS50Q96JG6 964 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 WDR24Q96S15 920 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 KLC2Q9H0B6 622 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 TMEM2Q9UHN6 1383 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 COPEO14579 308 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 MYL6BP14649 208 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 POLR2FP61218 127 aaKnown RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 SDE2Q6IQ49 451 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ZNF530Q6P9A1 599 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 TTC33Q6PID6 262 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 SPATA4Q8NEY3 305 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 EPS8L2Q9H6S3 715 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 CCSER2Q9H7U1 834 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 MBIPQ9NS73 344 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 DDX18Q9NVP1 670 aaKnown RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 RABL2AQ9UBK7 228 aaPredicted RBP10.98□□□□□ -0.65
SATB1-204ENST00000417717 SEL1LQ9UBV2 794 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 TTC21BQ7Z4L5 1316 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 ADGRA3Q8IWK6 1321 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 CDHR2Q9BYE9 1310 aa10.98□□□□□ -0.65
SATB1-204ENST00000417717 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
SATB1-204ENST00000417717 KRT20P35900 424 aa10.97□□□□□ -0.65
SATB1-204ENST00000417717 PSEN1P49768 467 aa10.97□□□□□ -0.65
SATB1-204ENST00000417717 RAB15P59190 212 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms