RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 FAM13AO94988 1023 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 ITGA4P13612 1032 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 FERP16591 822 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 GUCY1A3Q02108 690 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 DAAM2Q86T65 1068 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 KSR1Q8IVT5 923 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 ATP6V1G3Q96LB4 118 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 A0A087WUV0 522 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-208ENST00000413473 GTPBP10A4D1E9 387 aaKnown RBP16.32■□□□□ 0.2
TTC39A-208ENST00000413473 NDUFAB1O14561 156 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 CHMP2AO43633 222 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 EVI5O60447 810 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 SLITRK3O94933 977 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 GH2P01242 217 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 CYP3A4P08684 503 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 GAP43P17677 238 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 NR1D1P20393 614 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 PSMC2P35998 433 aaKnown RBP16.32■□□□□ 0.2
TTC39A-208ENST00000413473 STAT1P42224 750 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 GALCP54803 685 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 CUL1Q13616 776 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
TTC39A-208ENST00000413473 CALR3Q96L12 384 aaKnown RBP16.32■□□□□ 0.2
TTC39A-208ENST00000413473 FAM107BQ9H098 131 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 STXBP5LQ9Y2K9 1186 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 IGLV3-22A0A075B6J6 115 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 COG2Q14746 738 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 TTC31Q49AM3 519 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-208ENST00000413473 C1orf186Q6ZWK4 172 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 OTOP1Q7RTM1 612 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-208ENST00000413473 DYDC2Q96IM9 177 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 SUCLA2Q9P2R7 463 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-208ENST00000413473 AMACRQ9UHK6 382 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 A0A0A6YYK5 440 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-208ENST00000413473 A0A1W2PRG0 241 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 HSD17B3P37058 310 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 EMC10Q5UCC4 262 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 TADA2BQ86TJ2 420 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 NT5DC3Q86UY8 548 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 GLYCTKQ8IVS8 523 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
TTC39A-208ENST00000413473 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 NEUROG2Q9H2A3 272 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 INTUQ9ULD6 942 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
TTC39A-208ENST00000413473 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
TTC39A-208ENST00000413473 LSP1P33241 339 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 CENPHQ9H3R5 247 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 OSGEPQ9NPF4 335 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 KIF13BQ9NQT8 1826 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 FAM170AA1A519 330 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 CCDC188H7C350 402 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
TTC39A-208ENST00000413473 PPP1R12BO60237 982 aaPredicted RBP16.3■□□□□ 0.2
TTC39A-208ENST00000413473 CFBP00751 764 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 SOX5P35711 763 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 SYCE1Q8N0S2 351 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 MICALL1Q8N3F8 863 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 RASGEF1CQ8N431 466 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 C1orf131Q8NDD1 294 aaKnown RBP16.3■□□□□ 0.2
TTC39A-208ENST00000413473 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 SLC30A5Q8TAD4 765 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 DNAJC12Q9UKB3 198 aa16.3■□□□□ 0.2
TTC39A-208ENST00000413473 HMGB1P1B2RPK0 211 aaPredicted RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 F8VZ95 297 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 FMO5P49326 533 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 NPEPPSP55786 919 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 UAP1Q16222 522 aaPredicted RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 DACT2Q5SW24 774 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 STRIP1Q5VSL9 837 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 OLIG1Q8TAK6 271 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 HES6Q96HZ4 224 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 STK33Q9BYT3 514 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 TMBIM4Q9HC24 238 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 BHMG1C9JSJ3 638 aaPredicted RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 PIK3CDO00329 1044 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 DAPK3O43293 454 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 LIG3P49916 1009 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 SLC35G2Q8TBE7 412 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 LRRC45Q96CN5 670 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
TTC39A-208ENST00000413473 TUFT1Q9NNX1 390 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 AMFRQ9UKV5 643 aa16.29■□□□□ 0.2
TTC39A-208ENST00000413473 GOLGA6L10A6NI86 522 aa16.28■□□□□ 0.2
TTC39A-208ENST00000413473 BUB1BO60566 1050 aaPredicted RBP16.28■□□□□ 0.2
TTC39A-208ENST00000413473 PSMD10O75832 226 aa16.28■□□□□ 0.2
TTC39A-208ENST00000413473 TRIM37O94972 964 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms