RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CYP3A7P24462 503 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 CDC25AP30304 524 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 KCNJ6P48051 423 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 USP11P51784 963 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 CCZ1BP86790 482 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 CCZ1P86791 482 aaPredicted RBP19.04■□□□□ 0.64
PTPRC-206ENST00000413409 CDKAL1Q5VV42 579 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 CCDC47Q96A33 483 aaKnown RBP19.04■□□□□ 0.64
PTPRC-206ENST00000413409 MMTAG2Q9BU76 263 aaKnown RBP19.04■□□□□ 0.64
PTPRC-206ENST00000413409 SUGCTQ9HAC7 445 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 DDX25Q9UHL0 483 aaKnown RBP19.04■□□□□ 0.64
PTPRC-206ENST00000413409 RWDD2AQ9UIY3 292 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 SPTBN4Q9H254 2564 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 PTPRSQ13332 1948 aa19.04■□□□□ 0.64
PTPRC-206ENST00000413409 NRDCO43847 1150 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 RHOBTB3O94955 611 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 PPP1R2P41236 205 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 TECP42680 631 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 AMPD3Q01432 767 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 PAK1Q13153 545 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 STAMQ92783 540 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 C7orf25Q9BPX7 421 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 AP5M1Q9H0R1 490 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 KCND1Q9NSA2 647 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 LRWD1Q9UFC0 647 aa19.03■□□□□ 0.64
PTPRC-206ENST00000413409 ZFHX2Q9C0A1 2572 aaPredicted RBP19.03■□□□□ 0.64
PTPRC-206ENST00000413409 SOWAHBA6NEL2 793 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 RBAK-RBAKDNI3L0D1 243 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 KLRC4O43908 158 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 SFPQP23246 707 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTPRC-206ENST00000413409 STAT2P52630 851 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 SPAG1Q07617 926 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 IKQ13123 557 aaPredicted RBP19.02■□□□□ 0.64
PTPRC-206ENST00000413409 FAM133AQ8N9E0 248 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 PPP1R13LQ8WUF5 828 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 CRYGNQ8WXF5 182 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 MTUS1Q9ULD2 1270 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 PRR12Q9ULL5 1215 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 CTNND2Q9UQB3 1225 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 ZNF536O15090 1300 aa19.02■□□□□ 0.64
PTPRC-206ENST00000413409 C5orf42Q9H799 3197 aa19.02■□□□□ 0.63
PTPRC-206ENST00000413409 A0A1B0GTH6 734 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 PIK3CDO00329 1044 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 MEIS2O14770 477 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 ZEB2O60315 1214 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 IQCF3P0C7M6 154 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 CDK11BP21127 795 aaKnown RBP19.01■□□□□ 0.63
PTPRC-206ENST00000413409 RFC2P35250 354 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 TXKP42681 527 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 TMEM119Q4V9L6 283 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 COBLL1Q53SF7 1204 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 TAPT1Q6NXT6 567 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 CNNM4Q6P4Q7 775 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 FAM160B2Q86V87 743 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 C17orf53Q8N3J3 647 aaPredicted RBP19.01■□□□□ 0.63
PTPRC-206ENST00000413409 PRPF38AQ8NAV1 312 aaKnown RBP19.01■□□□□ 0.63
PTPRC-206ENST00000413409 CCDC112Q8NEF3 446 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 PRSS33Q8NF86 280 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 LRRC15Q8TF66 581 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 CTAGE1Q96RT6 745 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 KDM3AQ9Y4C1 1321 aa19.01■□□□□ 0.63
PTPRC-206ENST00000413409 SUPT20HL2P0C7V6 817 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 SKILP12757 684 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 SREBF1P36956 1147 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 STIM1Q13586 685 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 HYIQ5T013 277 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 KRT79Q5XKE5 535 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 KLHL10Q6JEL2 608 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 ARMCX5Q6P1M9 558 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 ADSSL1Q8N142 457 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 CHST13Q8NET6 341 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 CHURC1Q8WUH1 139 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 NAP1L5Q96NT1 182 aaPredicted RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 TRIM9Q9C026 710 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 LRRC27Q9C0I9 530 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 RANBP17Q9H2T7 1088 aaKnown RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 SLC38A10Q9HBR0 1119 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 KCNMB3Q9NPA1 279 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 TBX3O15119 743 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 ZBED4O75132 1171 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 ERVK-21P61565 698 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 TBX2Q13207 712 aaPredicted RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 ARID5BQ14865 1188 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 KMT5BQ4FZB7 885 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 USP17L6PQ6QN14 398 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 APTXQ7Z2E3 356 aaKnown RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 SMYD4Q8IYR2 804 aaPredicted RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 GIMAP8Q8ND71 665 aaPredicted RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 NEK9Q8TD19 979 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 NELFBQ8WX92 580 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 HAS1Q92839 578 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 PNMA5Q96PV4 448 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 SAMSN1Q9NSI8 373 aaKnown RBP19■□□□□ 0.63
PTPRC-206ENST00000413409 FBXO40Q9UH90 709 aa19■□□□□ 0.63
PTPRC-206ENST00000413409 C19orf67A6NJJ6 358 aa18.99■□□□□ 0.63
PTPRC-206ENST00000413409 H3BQ06 376 aaPredicted RBP18.99■□□□□ 0.63
PTPRC-206ENST00000413409 CIITAP33076 1130 aa18.99■□□□□ 0.63
PTPRC-206ENST00000413409 ARHGAP4P98171 946 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms