RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TRMT1LQ7Z2T5 733 aaKnown RBP7.36□□□□□ -1.23
VPS41-204ENST00000413141 MYOCDQ8IZQ8 938 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 MYCT1Q8N699 235 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 SCFD1Q8WVM8 642 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 TRIB2Q92519 343 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 PDLIM2Q96JY6 352 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 DRC1Q96MC2 740 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 FIZ1Q96SL8 496 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 CEP89Q96ST8 783 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
VPS41-204ENST00000413141 ATP6V0A4Q9HBG4 840 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 XPNPEP1Q9NQW7 623 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 FANCLQ9NW38 375 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 GABRQQ9UN88 632 aa7.36□□□□□ -1.23
VPS41-204ENST00000413141 DOCK3Q8IZD9 2030 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 ZMYM2Q9UBW7 1377 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 MYH9P35579 1960 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 SFI1A8K8P3 1242 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 K7ENM7 598 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 EIF3DO15371 548 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS41-204ENST00000413141 KIF20AO95235 890 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 GCNT3O95395 438 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 ZNF286BP0CG31 522 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 CYBAP13498 195 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 PLS3P13797 630 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 MARK3P27448 753 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 RFC5P40937 340 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 FLT3LGP49771 235 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 ZNF75DP51815 510 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 POLGP54098 1239 aaPredicted RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 TNFAIP2Q03169 654 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 LRRC63Q05C16 580 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 EMC2Q15006 297 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 PLCB4Q15147 1175 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 HSP90AA4PQ58FG1 418 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 PRAMEF19Q5SWL8 479 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 ODR4Q5SWX8 454 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 FAM102BQ5T8I3 360 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 CENPPQ6IPU0 288 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 FOXR2Q6PJQ5 311 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 MAEAQ7L5Y9 396 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 TLK2Q86UE8 772 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 FAM178BQ8IXR5 827 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 MCPH1Q8NEM0 835 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 OR6J1Q8NGC5 347 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 ATP8B4Q8TF62 1192 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 BBXQ8WY36 941 aaPredicted RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 KIFAP3Q92845 792 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 GLG1Q92896 1179 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 LENG1Q96BZ8 264 aaPredicted RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 PPP1R9BQ96SB3 815 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 DUSP9Q99956 384 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 TRIM5Q9C035 493 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 SEMA6BQ9H3T3 888 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 SMARCAD1Q9H4L7 1026 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 DHX33Q9H6R0 707 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 MRPL44Q9H9J2 332 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 POLD4Q9HCU8 107 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 GPRC5CQ9NQ84 441 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 PDLIM7Q9NR12 457 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 SAMSN1Q9NSI8 373 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 SAGE1Q9NXZ1 904 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 LARSQ9P2J5 1176 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 NRBP1Q9UHY1 535 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 GNEQ9Y223 722 aaKnown RBP7.35□□□□□ -1.23
VPS41-204ENST00000413141 PPME1Q9Y570 386 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 SIP14410 1827 aa7.35□□□□□ -1.23
VPS41-204ENST00000413141 MYH11P35749 1972 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 C19orf67A6NJJ6 358 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 GPR25O00155 361 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 PPP1R37O75864 691 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
VPS41-204ENST00000413141 AKR1A1P14550 325 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 CDC25BP30305 580 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 NMT1P30419 496 aaKnown RBP7.34□□□□□ -1.23
VPS41-204ENST00000413141 HOXD13P35453 343 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 NCKAP1LP55160 1127 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 SOX10P56693 466 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 RTP1P59025 263 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 FANCCQ00597 558 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 SPAG1Q07617 926 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 DMP1Q13316 513 aaPredicted RBP7.34□□□□□ -1.23
VPS41-204ENST00000413141 ALCAMQ13740 583 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
VPS41-204ENST00000413141 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 ANKRD40Q6AI12 368 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 LRRC55Q6ZSA7 311 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 STXBP4Q6ZWJ1 553 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 ZNF720Q7Z2F6 126 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.34□□□□□ -1.23
VPS41-204ENST00000413141 NELFCDQ8IXH7 590 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 CSGALNACT2Q8N6G5 542 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 TRPV1Q8NER1 839 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 ZNF507Q8TCN5 953 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 CD99L2Q8TCZ2 262 aa7.34□□□□□ -1.23
VPS41-204ENST00000413141 NOC3LQ8WTT2 800 aaKnown RBP7.34□□□□□ -1.23
VPS41-204ENST00000413141 SLC7A3Q8WY07 619 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms