RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 OTOP1Q7RTM1 612 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 HDXQ7Z353 690 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 HID1Q8IV36 788 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 SCYL3Q8IZE3 742 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 DHX38Q92620 1227 aaKnown RBP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 KIF1BPQ96EK5 621 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 ANTXR1Q9H6X2 564 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 ZNF552Q9H707 407 aaPredicted RBP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 IL1RAPL2Q9NP60 686 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 PIH1D3Q9NQM4 214 aaKnown RBP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 AATFQ9NY61 560 aaKnown RBP eCLIP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 KIAA0100Q14667 2235 aaKnown RBP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 RBBP6Q7Z6E9 1792 aaKnown RBP6.34□□□□□ -1.4
LINC00342-201ENST00000412393 NAV1Q8NEY1 1877 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 MYOCOSA0A1B0GUC4 107 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 CXCL11O14625 94 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 TLR2O60603 784 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 CTNND1O60716 968 aaKnown RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 IGSF3O75054 1194 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 IDH1O75874 414 aaKnown RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 CBX7O95931 251 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 ERVFC1P60507 584 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 TNK2Q07912 1038 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 ANKRD23Q86SG2 305 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 ADGRA1Q86SQ6 560 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 CLASRPQ8N2M8 674 aaKnown RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 GRIN3AQ8TCU5 1115 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 CRBNQ96SW2 442 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 OSBPL5Q9H0X9 879 aaPredicted RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 ADAMTS10Q9H324 1103 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 PTPN22Q9Y2R2 807 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 YBX2Q9Y2T7 364 aaKnown RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 KCTD3Q9Y597 815 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 ZHX2Q9Y6X8 837 aa6.33□□□□□ -1.4
LINC00342-201ENST00000412393 BAZ2AQ9UIF9 1905 aaKnown RBP6.33□□□□□ -1.4
LINC00342-201ENST00000412393 PDE4DIPQ5VU43 2346 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 LOC285556D6RIA3 1793 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 PDHXO00330 501 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 ENC1O14682 589 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 TRIM13O60858 407 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 RAB11FIP3O75154 756 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 IFIT2P09913 472 aaKnown RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 GSTT1P30711 240 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 TERF1P54274 439 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 DYNLL1P63167 89 aaKnown RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 CAP1Q01518 475 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 MAP3K12Q12852 859 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 MOGSQ13724 837 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 BECN1Q14457 450 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 KIF22Q14807 665 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 SKOR2Q2VWA4 1001 aaPredicted RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 C20orf194Q5TEA3 1177 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 GADL1Q6ZQY3 521 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 FASTKD5Q7L8L6 764 aaKnown RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 CCDC84Q86UT8 332 aaPredicted RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 SPPL2CQ8IUH8 684 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 MAPKAPK5Q8IW41 473 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 MAGEB6Q8N7X4 407 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 TGFBRAP1Q8WUH2 860 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 INTS4Q96HW7 963 aaKnown RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 RBCK1Q9BYM8 510 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 SP110Q9HB58 689 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 HERC5Q9UII4 1024 aaKnown RBP6.32□□□□□ -1.4
LINC00342-201ENST00000412393 AFG3L2Q9Y4W6 797 aa6.32□□□□□ -1.4
LINC00342-201ENST00000412393 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 HRKO00198 91 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 ETV3P41162 512 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 LACTBP83111 547 aaPredicted RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 CHRNEQ04844 493 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 TTF1Q15361 905 aaPredicted RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 GAB4Q2WGN9 574 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 TMED8Q6PL24 325 aaPredicted RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 C17orf99Q6UX52 265 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 ZNF605Q86T29 641 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 CERS3Q8IU89 383 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 FOXP4Q8IVH2 680 aaPredicted RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 CCDC82Q8N4S0 544 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 CRACR2BQ8N4Y2 399 aaPredicted RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 MIGA1Q8NAN2 632 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 C3orf58Q8NDZ4 430 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 PARK7Q99497 189 aaKnown RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 PI4KBQ9UBF8 816 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 SAP30BPQ9UHR5 308 aaKnown RBP6.31□□□□□ -1.4
LINC00342-201ENST00000412393 CPA4Q9UI42 421 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 PALD1Q9ULE6 856 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
LINC00342-201ENST00000412393 DDX60LQ5H9U9 1706 aaKnown RBP6.3□□□□□ -1.4
LINC00342-201ENST00000412393 FLT1P17948 1338 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms